RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 FAM19A5Q7Z5A7 132 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR4N5Q8IXE1 308 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 VKORC1L1Q8N0U8 176 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF485Q8NCK3 441 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 NEU4Q8WWR8 484 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 FAM173AQ9BQD7 235 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 KRTAP9-8Q9BYQ0 159 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 SLC29A3Q9BZD2 475 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR51J1Q9H342 316 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 STARD5Q9NSY2 213 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 KALRNO60229 2985 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 COL5A1P20908 1838 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 ANKRD12Q6UB98 2062 aa4.25□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR5H1A6NKK0 313 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 M0R233 179 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 EI24O14681 340 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 ARPC2O15144 300 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF207O43670 478 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 SNAPC5O75971 98 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR7C1O76099 320 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 CFDP00746 253 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 NMBP08949 121 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 SLC2A5P22732 501 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 CD34P28906 385 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 IMPA1P29218 277 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 PEBP1P30086 187 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 ISL1P61371 349 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 ANXA2RQ3ZCQ2 193 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 TRMT12Q53H54 448 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 AGTRAPQ6RW13 159 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 OPN5Q6U736 354 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 EPGNQ6UW88 154 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 SBSNQ6UWP8 590 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 CD300LDQ6UXZ3 194 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 Q6ZRG5 221 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 C16orf82Q7Z2V1 217 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZAR1Q86SH2 424 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 OSR2Q8N2R0 312 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 RAB42Q8N4Z0 105 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR5M9Q8NGP3 310 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 RDH11Q8TC12 318 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 DOK4Q8TEW6 326 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 CANT1Q8WVQ1 401 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 TMEM125Q96AQ2 219 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 MACROD1Q9BQ69 325 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 SLC25A39Q9BZJ4 359 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 CST9LQ9H4G1 147 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 FAM60AQ9NP50 221 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 TPSG1Q9NRR2 321 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 TNFSF18Q9UNG2 199 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 RPL36Q9Y3U8 105 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR2M5A3KFT3 312 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 NKX2-6A6NCS4 301 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 CEACAM18A8MTB9 384 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 FOXI3A8MTJ6 420 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 A8MVM7 634 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 CORTO00230 105 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 TAAR5O14804 337 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 REG1AP05451 166 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 FGF3P11487 239 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 CD1DP15813 335 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 LTBQ06643 244 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 EIF2B1Q14232 305 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 TGIF1Q15583 401 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 FAM219BQ5XKK7 198 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 OTPQ5XKR4 325 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR4C11Q6IEV9 310 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR4A47Q6IF82 309 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 C22orf34Q6ZV56 151 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 FAM231DQ6ZW35 169 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 RPS27LQ71UM5 84 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 FA2HQ7L5A8 372 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 SVBPQ8N300 66 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 METTL27Q8N6F8 245 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR9I1Q8NGQ6 314 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR1L8Q8NGR8 309 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR4X1Q8NH49 305 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 C11orf45Q8TAV5 145 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 RXFP4Q8TDU9 374 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 RNF128Q8TEB7 428 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 RASL10AQ92737 203 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 DNAJC30Q96LL9 226 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 ERMAPQ96PL5 475 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 TP53RKQ96S44 253 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 FOXC2Q99958 501 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 LPAR5Q9H1C0 372 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 MEGF9Q9H1U4 602 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 TMEM38BQ9NVV0 291 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 AURKAIP1Q9NWT8 199 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 FAM30AQ9NZY2 134 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 Q9UF83 564 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 PKIGQ9Y2B9 76 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 U3KQE9 123 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 CHD6Q8TD26 2715 aa4.24□□□□□ -1.73
TRAPPC11-208ENST00000511955 A0A087WX48 190 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 TLCD2A6NGC4 264 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 GFYI3L273 518 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 HSD17B6O14756 317 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 CCL25O15444 150 aa4.23□□□□□ -1.73
TRAPPC11-208ENST00000511955 IGHV2-5P01817 119 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms