RNA–Protein interactions for RNA: ENST00000511496.5

LIMCH1-213, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-213ENST00000511496 TMEM95Q3KNT9 176 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 EMC4Q5J8M3 183 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 KIAA0895LQ68EN5 471 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 STUMQ69YW2 141 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 BRICD5Q6PL45 260 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 KLHL24Q6TFL4 600 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 CHRDL2Q6WN34 429 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 MBD3L1Q8WWY6 194 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 ARRDC3Q96B67 414 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 C1orf147Q96MC9 270 aaPredicted RBP10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 NUDT16L1Q9BRJ7 211 aaKnown RBP10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 SLC25A22Q9H936 323 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 CLEC1BQ9P126 229 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 ANXA10Q9UJ72 324 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 CACNA1DQ01668 2161 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 MUC21A0A0G2JKD1 596 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 MUC21A0A140T8X8 626 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 G3V4G9 280 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 TIAF1O95411 115 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 ERGP11308 486 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 ZNF90Q03938 601 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 EGR4Q05215 589 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 MUC21Q5SSG8 566 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 OR2M7Q8NG81 312 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 NAT6Q93015 286 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 CCDC3Q9BQI4 270 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 PILRBQ9UKJ0 227 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 TRAV8-6A0A0B4J262 113 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 GAGE10A6NGK3 116 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 HS3ST1O14792 307 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 NRASP01111 189 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 KRASP01116 189 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 FRMD6-AS1P0C7T7 363 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 STAG3L3P0CL85 134 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 AZU1P20160 251 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 MSR1P21757 451 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 IER3P46695 156 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 THBS3P49746 956 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 CRYBA4P53673 196 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 Q56UQ5 140 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 CBLN3Q6UW01 205 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 HAPLN4Q86UW8 402 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 ZIC4Q8N9L1 334 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 TMEM52Q8NDY8 209 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 OR4F17Q8NGA8 305 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 BORCS7Q96B45 105 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 LRFN3Q9BTN0 628 aa10.38□□□□□ -0.75
LIMCH1-213ENST00000511496 MYO7BQ6PIF6 2116 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 CRYAAP02489 173 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 RAB9AP51151 201 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 FAM71F2Q6NXP2 309 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 VASH2Q86V25 355 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 OR8I2Q8N0Y5 310 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 MUC15Q8N387 334 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 ZNF501Q96CX3 271 aaPredicted RBP10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 PBOV1Q9GZY1 135 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 MRPL27Q9P0M9 148 aaKnown RBP10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 TDRD6O60522 2096 aaKnown RBP10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 ZNF816-ZNF321PA0A0X1KG74 233 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 SERINC4A6NH21 518 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 PAGE4O60829 102 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 GNRHRP30968 328 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 FMODQ06828 376 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 HLA-DRB5Q30154 266 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 HLA-BQ31612 363 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 DGAT2L6Q6ZPD8 337 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 PNKDQ8N490 385 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 GNB4Q9HAV0 340 aa10.37□□□□□ -0.75
LIMCH1-213ENST00000511496 SRSF10O75494 262 aaKnown RBP10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 EFEMP2O95967 443 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 KITLGP21583 273 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 HIST3H3Q16695 136 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 PRTGQ2VWP7 1150 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 C20orf196Q8IYI0 205 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 C5orf17Q8NAS9 161 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 SLC38A9Q8NBW4 561 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 CHRDL1Q9BU40 450 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 HCFC2Q9Y5Z7 792 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 KIAA1549Q9HCM3 1950 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 SNURFLB1AK76 121 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 M0R1X1 148 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 B3GALT2O43825 422 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 HAND1O96004 215 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 ESDP10768 282 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 FUT6P51993 359 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 CLDN15P56746 228 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 TMEM144Q7Z5S9 345 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 OR5B3Q8NH48 314 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 SIGLEC12Q96PQ1 595 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 RAB11FIP5Q9BXF6 653 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 C11orf1Q9H5F2 150 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 FNDC4Q9H6D8 234 aaPredicted RBP10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 IGLV1-36A0A0B4J1U3 117 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 TMEM250H0YL14 139 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 NKX2-2O95096 273 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 IGLL1P15814 213 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 PPOXP50336 477 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 PSG4Q00888 419 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 PMP22Q01453 160 aa10.36□□□□□ -0.75
LIMCH1-213ENST00000511496 ZP4Q12836 540 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms