RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 CAMLGP49069 296 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 HOXA1P49639 335 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 RAB13P51153 203 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 P2RY6Q15077 328 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 MIDNQ504T8 468 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 AVPI1Q5T686 147 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 ZNF474Q6S9Z5 364 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 CXorf67Q86X51 503 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 ZNF565Q8N9K5 539 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 CLEC18CQ8NCF0 446 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 LFNGQ8NES3 379 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 OR5A2Q8NGI9 324 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 BCL2L2Q92843 193 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 BSCL2Q96G97 398 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 BOD1Q96IK1 185 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 BBC3Q96PG8 261 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 SPACA1Q9HBV2 294 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 C19orf12Q9NSK7 152 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 RTTNQ86VV8 2226 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 TRBV6-6A0A0A6YYG2 114 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 A0A1B0GW64 132 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 C9JQL5 133 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 AGPAT2O15120 278 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 PITX3O75364 302 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 HLA-HP01893 362 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 MMP9P14780 707 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 GNRHRP30968 328 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 EWSR1Q01844 656 aaKnown RBP eCLIP13.64□□□□□ -0.233e-8■■■□□ 18.8
SQSTM1-213ENST00000510187 TLE1Q04724 770 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 ZNF266Q14584 549 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 TSC22D1Q15714 1073 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 IGSF11Q5DX21 431 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 C15orf54Q8N8G6 183 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 IL22RA2Q969J5 263 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 SLAMF9Q96A28 289 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 FGF23Q9GZV9 251 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 SAV1Q9H4B6 383 aaPredicted RBP13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 BIN3Q9NQY0 253 aa13.64□□□□□ -0.23
SQSTM1-213ENST00000510187 NBASA2RRP1 2371 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 A8MXE2 369 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 TRAPPC2LH3BP13 241 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 NKX2-1P43699 371 aaPredicted RBP13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 HAAOP46952 286 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 PDCD1Q15116 288 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 GABRA6Q16445 453 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 GUK1Q16774 197 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 MEX3BQ6ZN04 569 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 TBC1D26Q86UD7 250 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 ZNF695Q8IW36 515 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 OR2C3Q8N628 320 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 C1orf162Q8NEQ5 155 aaPredicted RBP13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 OR8G5Q8NG78 346 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 NANOS1Q8WY41 292 aaKnown RBP13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 PBDC1Q9BVG4 233 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 SCRT1Q9BWW7 348 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 SLC25A31Q9H0C2 315 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 SMDT1Q9H4I9 107 aa13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 UBE2J1Q9Y385 318 aaPredicted RBP13.63□□□□□ -0.23
SQSTM1-213ENST00000510187 C5orf49A4QMS7 147 aa13.62□□□□□ -0.23
SQSTM1-213ENST00000510187 ZNF503-AS2A6NEH8 195 aa13.62□□□□□ -0.23
SQSTM1-213ENST00000510187 PRB1P04280 392 aa13.62□□□□□ -0.23
SQSTM1-213ENST00000510187 GPM6AP51674 278 aa13.62□□□□□ -0.23
SQSTM1-213ENST00000510187 UBE2NP61088 152 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-213ENST00000510187 IGFBP7Q16270 282 aa13.62□□□□□ -0.23
SQSTM1-213ENST00000510187 MRGPRGQ86SM5 289 aa13.62□□□□□ -0.23
SQSTM1-213ENST00000510187 SELENOHQ8IZQ5 122 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-213ENST00000510187 HIST1H2AAQ96QV6 131 aa13.62□□□□□ -0.23
SQSTM1-213ENST00000510187 USB1Q9BQ65 265 aaKnown RBP13.62□□□□□ -0.23
SQSTM1-213ENST00000510187 ATP23Q9Y6H3 246 aa13.62□□□□□ -0.23
SQSTM1-213ENST00000510187 NKX2-6A6NCS4 301 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 OR5B21A6NL26 309 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 ZNF732B4DXR9 585 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 UMAD1C9J7I0 102 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 NFYBP25208 207 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 UCP1P25874 307 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 HOXC12P31275 282 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 RAB1AP62820 205 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 ZNF616Q08AN1 781 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 BHLHA15Q7RTS1 189 aaPredicted RBP13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 IQCF2Q8IXL9 164 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 PRR7Q8TB68 274 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 RXFP4Q8TDU9 374 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 SECTM1Q8WVN6 248 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 AKR1E2Q96JD6 320 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 POM121L2Q96KW2 1035 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 EGLN1Q9GZT9 426 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 PLEKHF2Q9H8W4 249 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 MEX3AA1L020 520 aaKnown RBP13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 COLCA2A8K830 154 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 H0Y980 276 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 K7N7A8 449 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 PRH1P02810 166 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 WNT2P09544 360 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 PPT1P50897 306 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 NHLH2Q02577 135 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 PLP2Q04941 152 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 BAXQ07812 192 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 CLEC9AQ6UXN8 241 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 OR5D13Q8NGL4 314 aa13.61□□□□□ -0.23
SQSTM1-213ENST00000510187 TUBA4BQ9H853 241 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms