RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 C1QTNF9BB2RNN3 333 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 G3V3Y1 287 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 MRPL33O75394 65 aaKnown RBP7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 CNOT4O95628 575 aaKnown RBP7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 CXCL1P09341 107 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 HAAOP46952 286 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 ERVFRD-1P60508 538 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 ERVK11-1P61568 191 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 WIPI1Q5MNZ9 446 aaPredicted RBP7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 DBX2Q6ZNG2 339 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 MRPL21Q7Z2W9 205 aaKnown RBP7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 MRGPRGQ86SM5 289 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 Q8IYB0 196 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 FAM173AQ9BQD7 235 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 OR51I2Q9H344 312 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF703Q9H7S9 590 aaPredicted RBP7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 CDH20Q9HBT6 801 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 GP6Q9HCN6 339 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 SDF2L1Q9HCN8 221 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 DOK5Q9P104 306 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 UNC80Q8N2C7 3258 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 A0A0G2JRQ6 117 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 H0YL77 283 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 IGKV1-39P01597 117 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 IGKV1D-39P04432 117 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 CYB561P49447 251 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 GNG3P63215 75 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF154Q13106 437 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 TESK1Q15569 626 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 TMEM249Q2WGJ8 235 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 COA6Q5JTJ3 125 aaKnown RBP7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 OR10V1Q8NGI7 309 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 ABHD3Q8WU67 409 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 HS3ST6Q96QI5 342 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 CRIM1Q9NZV1 1036 aa7.85□□□□□ -1.15
PDGFRA-208ENST00000509490 PINLYPA6NC86 204 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 CD300LBA8K4G0 201 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 J3QT63 122 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 SYNGR2O43760 224 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST1H2BKO60814 126 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 OPN1MWP04001 364 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST1H2BJP06899 126 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 OPN1MW2P0DN77 364 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 OPN1MW3P0DN78 364 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 CBR1P16152 277 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST1H2BOP23527 126 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 ACP1P24666 158 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST1H2BBP33778 126 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST1H2BDP58876 126 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 OR2B8PP59922 312 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST1H2BCP62807 126 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 EIF4EBP1Q13541 118 aaPredicted RBP7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST2H2BEQ16778 126 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 AKIRIN2Q53H80 203 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 SPIN3Q5JUX0 258 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 TMEM14EPQ6UXP3 125 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF497Q6ZNH5 498 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 UBALD2Q8IYN6 164 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST3H2BBQ8N257 126 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 TCTEX1D1Q8N7M0 179 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 OR10J5Q8NHC4 309 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 FAM216AQ8WUB2 273 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST1H2BHQ93079 126 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST1H2BNQ99877 126 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HIST1H2BMQ99879 126 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 MRPL37Q9BZE1 423 aaKnown RBP7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 GAR1Q9NY12 217 aaKnown RBP7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 DLL3Q9NYJ7 618 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 OR14J1Q9UGF5 321 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 VAX2Q9UIW0 290 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 CLDN34H7C241 214 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 CST7O76096 145 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 CER1O95813 267 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 GLI4P10075 376 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 GPM6AP51674 278 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HBG1P69891 147 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 HBG2P69892 147 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF726P1Q15940 193 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 ATP6V1FQ16864 119 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 TMEM41BQ5BJD5 291 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 FAM58AQ8N1B3 248 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 LINC00469Q8N7U9 141 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 PRRG4Q9BZD6 226 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 MAGT1Q9H0U3 335 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 PRO3102Q9H379 93 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 LIN7CQ9NUP9 197 aaKnown RBP7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 SIT1Q9Y3P8 196 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 RFNGQ9Y644 331 aa7.84□□□□□ -1.15
PDGFRA-208ENST00000509490 GDF9O60383 454 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 PTBP3O95758 552 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 IGKV1-5P01602 117 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 RPS10P46783 165 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 ASCL1P50553 236 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 PDCD1Q15116 288 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF585BQ52M93 769 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 PYY3Q5JQD4 70 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 FAM209BQ5JX69 171 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 C20orf204Q6ZNR8 217 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 HAPLN4Q86UW8 402 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms