RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 FOXE3Q13461 319 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 PNLIPRP3Q17RR3 467 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 Q499Y3 187 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 SLC22A6Q4U2R8 563 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 ATAD3CQ5T2N8 411 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 OR2G6Q5TZ20 316 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 DMKNQ6E0U4 476 aaPredicted RBP12.12□□□□□ -0.47
SMAD5-205ENST00000509297 UNQ9370/PRO34162Q6UXP9 181 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 SLC25A48Q6ZT89 311 aaKnown RBP12.12□□□□□ -0.47
SMAD5-205ENST00000509297 C18orf65Q6ZTR6 163 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 STX19Q8N4C7 294 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 Q8N9W7 124 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 ZNF555Q8NEP9 628 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 GHSRQ92847 366 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 ZNF184Q99676 751 aaPredicted RBP12.12□□□□□ -0.47
SMAD5-205ENST00000509297 LINC00527Q9UJ94 153 aa12.12□□□□□ -0.47
SMAD5-205ENST00000509297 EXOSC1Q9Y3B2 195 aaKnown RBP12.12□□□□□ -0.47
SMAD5-205ENST00000509297 LINC01548A6NM66 108 aa12.11□□□□□ -0.47
SMAD5-205ENST00000509297 NCBP2LA6PVI3 153 aaKnown RBP12.11□□□□□ -0.47
SMAD5-205ENST00000509297 C12orf77C9JDV5 145 aa12.11□□□□□ -0.47
SMAD5-205ENST00000509297 AIPO00170 330 aa12.11□□□□□ -0.47
SMAD5-205ENST00000509297 CA11O75493 328 aa12.11□□□□□ -0.47
SMAD5-205ENST00000509297 GLAP06280 429 aa12.11□□□□□ -0.47
SMAD5-205ENST00000509297 ELANEP08246 267 aa12.11□□□□□ -0.47
SMAD5-205ENST00000509297 CDX1P47902 265 aaPredicted RBP12.11□□□□□ -0.47
SMAD5-205ENST00000509297 REG1BP48304 166 aa12.11□□□□□ -0.47
SMAD5-205ENST00000509297 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMAD5-205ENST00000509297 ZNF485Q8NCK3 441 aa12.11□□□□□ -0.47
SMAD5-205ENST00000509297 ZNF439Q8NDP4 499 aa12.11□□□□□ -0.47
SMAD5-205ENST00000509297 RAX2Q96IS3 184 aa12.11□□□□□ -0.47
SMAD5-205ENST00000509297 S1PR3Q99500 378 aa12.11□□□□□ -0.47
SMAD5-205ENST00000509297 TRBV5-7A0A0A0MS05 114 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 IGHV3-72A0A0B4J1Y9 119 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 A0A1W2PP11 408 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 FAM90A10PA6NDY2 464 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 FAM90A7PA6NKC0 464 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 FAM90A23PA8MXZ1 464 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 MCRIP1C9JLW8 97 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 CCL24O00175 119 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 SPINT2O43291 252 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 RRP9O43818 475 aaKnown RBP12.1□□□□□ -0.47
SMAD5-205ENST00000509297 RAMP3O60896 148 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 LALBAP00709 142 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 DGCR2P98153 550 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 CFHR3Q02985 330 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 CD69Q07108 199 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 MED21Q13503 144 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 GPR50Q13585 617 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 KIR2DS1Q14954 304 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 C6orf183Q5T699 404 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 C11orf87Q6NUJ2 197 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 TRAT1Q6PIZ9 186 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 ZNF554Q86TJ5 538 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 FAM71E2Q8N5Q1 922 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 OR8U1Q8NH10 309 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 NEK7Q8TDX7 302 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 CCDC107Q8WV48 283 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 PGLYRP3Q96LB9 341 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 DCLRE1BQ9H816 532 aa12.1□□□□□ -0.47
SMAD5-205ENST00000509297 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMAD5-205ENST00000509297 TRAV8-7A0A075B6U6 113 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 SC5DO75845 299 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 IGHG4P01861 327 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 IGF1P05019 195 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 VHLP40337 213 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 CXorf66Q5JRM2 361 aaPredicted RBP12.09□□□□□ -0.47
SMAD5-205ENST00000509297 RAB12Q6IQ22 244 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 OR13C5Q8NGS8 318 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 ORAI1Q96D31 301 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 TMEM80Q96HE8 168 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 RASL11BQ9BPW5 248 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 CHCHD6Q9BRQ6 235 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 CHCHD3Q9NX63 227 aaKnown RBP12.09□□□□□ -0.47
SMAD5-205ENST00000509297 GNG12Q9UBI6 72 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 CLEC2DQ9UHP7 191 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 TRAPPC2LQ9UL33 140 aa12.09□□□□□ -0.47
SMAD5-205ENST00000509297 MRPS28Q9Y2Q9 187 aaKnown RBP12.09□□□□□ -0.47
SMAD5-205ENST00000509297 MAGEA13PA6NCF6 341 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 LANCL1O43813 399 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 RPLP1P05386 114 aaKnown RBP12.08□□□□□ -0.48
SMAD5-205ENST00000509297 SOX6P35712 828 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 ZNF134P52741 427 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 TAS2R43P59537 309 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 SYT6Q5T7P8 510 aaPredicted RBP12.08□□□□□ -0.48
SMAD5-205ENST00000509297 TTC23Q5W5X9 447 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 FAM53AQ6NSI3 398 aaPredicted RBP12.08□□□□□ -0.48
SMAD5-205ENST00000509297 GLIPR1L1Q6UWM5 242 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 LYPD6Q86Y78 171 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 UBALD1Q8TB05 177 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 C8orf4Q9NR00 106 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 MBNL3Q9NUK0 354 aaKnown RBP12.08□□□□□ -0.48
SMAD5-205ENST00000509297 ETAA1Q9NY74 926 aa12.08□□□□□ -0.48
SMAD5-205ENST00000509297 IGHV3-43A0A0B4J1X8 118 aa12.07□□□□□ -0.48
SMAD5-205ENST00000509297 ZNF736B4DX44 427 aaPredicted RBP12.07□□□□□ -0.48
SMAD5-205ENST00000509297 SLC31A2O15432 143 aa12.07□□□□□ -0.48
SMAD5-205ENST00000509297 HBZP02008 142 aa12.07□□□□□ -0.48
SMAD5-205ENST00000509297 CD1AP06126 327 aa12.07□□□□□ -0.48
SMAD5-205ENST00000509297 NHLRC4P0CG21 123 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms