RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 COMPP49747 757 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 LOXL3P58215 753 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 SRSF4Q08170 494 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 MPV17LQ2QL34 196 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 AWAT1Q58HT5 328 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 PLAC9Q5JTB6 97 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 NCR3LG1Q68D85 454 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 HEPN1Q6WQI6 88 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 ZNF439Q8NDP4 499 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 BEND2Q8NDZ0 799 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 OR51D1Q8NGF3 324 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 OR6M1Q8NGM8 313 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 PPP1R35Q8TAP8 253 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 ZFAND2BQ8WV99 257 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 CENPOQ9BU64 300 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 SELENOIQ9C0D9 397 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 TMEM133Q9H2Q1 129 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 TXNL4BQ9NX01 149 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 CKLFQ9UBR5 152 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 ELF5Q9UKW6 265 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 KCNK7Q9Y2U2 307 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 UBE2J1Q9Y385 318 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 LRRC42Q9Y546 428 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 NBEAL1Q6ZS30 2694 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 MEGF8Q7Z7M0 2845 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 MEIKINA0A087WXM9 373 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 IGHV3-43A0A0B4J1X8 118 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 TRAV1-2A0A0B4J238 106 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 KBTBD11-OT1A0A1B0GTJ5 212 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 A0A1W2PPE3 182 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 A0A1W2PPI3 338 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 H3BUX3 64 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 MAGEB3O15480 346 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 PDCD6O75340 191 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 MT-ND4P03905 459 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 ARG1P05089 322 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 IGHV3-43DP0DP04 118 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 RCC1P18754 421 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 PSMA1P25786 263 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 KIR3DS1Q14943 382 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 LTC4SQ16873 150 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 MIDNQ504T8 468 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 SLC35E4Q6ICL7 350 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 RAB12Q6IQ22 244 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 ZNF880Q6PDB4 577 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 SLC16A12Q6ZSM3 486 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 Q6ZSV7 163 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 C6orf201Q7Z4U5 140 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 LINC00596Q86U02 117 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 CMTM4Q8IZR5 234 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM89BQ8N5H3 189 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 TMEM86BQ8N661 226 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 TEX29Q8N6K0 151 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 OR5D13Q8NGL4 314 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 OR4K15Q8NH41 348 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 OR1L1Q8NH94 360 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 RFESDQ8TAC1 157 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 TMEM158Q8WZ71 300 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 SLC25A38Q96DW6 304 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 TMEM59Q9BXS4 323 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 YTHDF1Q9BYJ9 559 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 NAA50Q9GZZ1 169 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 Q9H521 79 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 MBNL3Q9NUK0 354 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 TAS2R3Q9NYW6 316 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 SCOCQ9UIL1 159 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 VPREB3Q9UKI3 123 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 STUB1Q9UNE7 303 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 SIGLEC9Q9Y336 463 aa5.79□□□□□ -1.48
TOPBP1-207ENST00000509162 TRGV10A0A0A0MS01 117 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 IGKV1-6A0A0C4DH72 117 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 TMEM30CPA0ZSE6 113 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 UBE2QL1A1L167 161 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 A6NDX4 124 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A10PA6NDY2 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A18PA6NE21 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A16PA6NEW6 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A20PA6NIJ5 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A7PA6NKC0 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 ZNF729A6NN14 1252 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A22PA8MWA6 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A12PA8MX19 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A5PA8MXJ8 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A23PA8MXZ1 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 F2RL2O00254 374 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 MFNGO00587 321 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 NAPSAO96009 420 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 PAHP00439 452 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 LPLP06858 475 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FBP1P09467 338 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A15PP0C7V4 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A13PP0C7W8 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A14PP0C7W9 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM90A24PP0C7X0 464 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 GTF2F2P13984 249 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 FGF9P31371 208 aaPredicted RBP5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 GNG10P50151 68 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 RAB13P51153 203 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 BPIFB3P59826 476 aa5.78□□□□□ -1.48
TOPBP1-207ENST00000509162 HERPUD1Q15011 391 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms