RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 METAP1P53582 386 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 PAX2Q02962 417 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 TLE3Q04726 772 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEM108Q6UXF1 575 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 C6orf201Q7Z4U5 140 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEM25Q86YD3 366 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 WFDC8Q8IUA0 241 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 GATSQ8NAP1 163 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 OR4F5Q8NH21 305 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 SGCZQ96LD1 299 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEM222Q9H0R3 208 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 SMPXQ9UHP9 88 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 CEP290O15078 2479 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 DOCK11Q5JSL3 2073 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 C3orf85A0A1B0GTC6 90 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 ODAMA1E959 279 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 PRRT4C9JH25 899 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 ADAM20O43506 726 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 LATO43561 262 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 CHST1O43916 411 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 LGALS7P47929 136 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 PAX9P55771 341 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 SGCBQ16585 318 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEM95Q3KNT9 176 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 CHRDL2Q6WN34 429 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 ERASQ7Z444 233 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 ZNF695Q8IW36 515 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 CPT1CQ8TCG5 803 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 TM4SF19Q96DZ7 209 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 NEIL1Q96FI4 390 aaPredicted RBP8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 UBE2ZQ9H832 354 aaPredicted RBP8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 SLC39A9Q9NUM3 307 aa8.62□□□□□ -1.03
PDGFRA-207ENST00000509092 TRAV36DV7A0A075B6V5 113 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 SAA2-SAA4A0A096LPE2 208 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 DPRXA6NFQ7 191 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 F2Z2F3 143 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 G3V4G9 280 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 TNFSF12O43508 249 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 REG1AP05451 166 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 SCGB1A1P11684 91 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 PRRX1P54821 245 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 EIF3IQ13347 325 aaKnown RBP8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 ELAVL3Q14576 367 aaKnown RBP8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 TESK1Q15569 626 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 FNDC7Q5VTL7 733 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 SAMD13Q5VXD3 122 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 DNM1P34Q6PK57 102 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEFF1Q8IYR6 380 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 SELENOHQ8IZQ5 122 aaKnown RBP8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 BCORP1Q8N888 145 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 SGMS2Q8NHU3 365 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 SPACA7Q96KW9 195 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 MOB1AQ9H8S9 216 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 PLEKHJ1Q9NW61 149 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 TRAV9-1A0A075B6T8 112 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 MPPED1O15442 326 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 SAP30O75446 220 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 SLC35E2P0CK97 266 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 CLDN15P56746 228 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 AMMECR1LQ6DCA0 310 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 FAM180AQ6UWF9 173 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 ERN2Q76MJ5 926 aaKnown RBP8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 C1QL2Q7Z5L3 287 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 COMMD2Q86X83 199 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 UEVLDQ8IX04 471 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 SHISA5Q8N114 240 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 ASB10Q8WXI3 467 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 MRPL13Q9BYD1 178 aaKnown RBP8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 CLEC1BQ9P126 229 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 POLR1DQ9Y2S0 133 aa8.61□□□□□ -1.03
PDGFRA-207ENST00000509092 J3QR06 171 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 TMPRSS2O15393 492 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 RBFOX2O43251 390 aaKnown RBP eCLIP8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 OR7C2O60412 319 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 ZNF205O95201 554 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 MT-ATP6P00846 226 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 CBLN1P23435 193 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 WASP42768 502 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 AMTP48728 403 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 CLDN17P56750 224 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 MLF1P58340 268 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 PMCHL1Q16048 86 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 NNATQ16517 81 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 ASCL4Q6XD76 172 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 ZNF721Q8TF20 911 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 OR5P3Q8WZ94 311 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 ADIPOR1Q96A54 375 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 UBE2J1Q9Y385 318 aaPredicted RBP8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 ADAMTS9Q9P2N4 1935 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 OR2T8A6NH00 312 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 DUSP3P51452 185 aaPredicted RBP8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 HERV-K104P61576 105 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 TMEM267Q0VDI3 215 aaPredicted RBP8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 NMSQ5H8A3 153 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 STUMQ69YW2 141 aa8.6□□□□□ -1.03
PDGFRA-207ENST00000509092 WDR73Q6P4I2 378 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms