RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 WSB1Q9Y6I7 421 aa12.65□□□□□ -0.38
SNF8-205ENST00000507302 GABRPO00591 440 aa12.64□□□□□ -0.39
SNF8-205ENST00000507302 LANCL1O43813 399 aa12.64□□□□□ -0.39
SNF8-205ENST00000507302 IGLV1-51P01701 117 aa12.64□□□□□ -0.39
SNF8-205ENST00000507302 LSAMPQ13449 338 aa12.64□□□□□ -0.39
SNF8-205ENST00000507302 ZSCAN26Q16670 478 aa12.64□□□□□ -0.39
SNF8-205ENST00000507302 RFKQ969G6 155 aa12.64□□□□□ -0.39
SNF8-205ENST00000507302 SPATA25Q9BR10 227 aa12.64□□□□□ -0.39
SNF8-205ENST00000507302 THTPAQ9BU02 230 aa12.64□□□□□ -0.39
SNF8-205ENST00000507302 IL36GQ9NZH8 169 aa12.64□□□□□ -0.39
SNF8-205ENST00000507302 ENOPH1Q9UHY7 261 aa12.64□□□□□ -0.39
SNF8-205ENST00000507302 MRPS28Q9Y2Q9 187 aaKnown RBP12.64□□□□□ -0.39
SNF8-205ENST00000507302 TNCP24821 2201 aa12.64□□□□□ -0.39
SNF8-205ENST00000507302 TRAV41A0A0B4J266 112 aa12.63□□□□□ -0.39
SNF8-205ENST00000507302 TMEM30CPA0ZSE6 113 aa12.63□□□□□ -0.39
SNF8-205ENST00000507302 HSPA12AO43301 675 aa12.63□□□□□ -0.39
SNF8-205ENST00000507302 SOX15O60248 233 aa12.63□□□□□ -0.39
SNF8-205ENST00000507302 JTBO76095 146 aa12.63□□□□□ -0.39
SNF8-205ENST00000507302 HTR1AP08908 422 aa12.63□□□□□ -0.39
SNF8-205ENST00000507302 LGALS1P09382 135 aaKnown RBP12.63□□□□□ -0.39
SNF8-205ENST00000507302 SLC2A2P11168 524 aaPredicted RBP12.63□□□□□ -0.39
SNF8-205ENST00000507302 GABPB1Q06547 395 aaPredicted RBP12.63□□□□□ -0.39
SNF8-205ENST00000507302 ALKBH1Q13686 389 aaKnown RBP12.63□□□□□ -0.39
SNF8-205ENST00000507302 TMEM30BQ3MIR4 351 aa12.63□□□□□ -0.39
SNF8-205ENST00000507302 CT45A1Q5HYN5 189 aa12.63□□□□□ -0.39
SNF8-205ENST00000507302 ZNF497Q6ZNH5 498 aa12.63□□□□□ -0.39
SNF8-205ENST00000507302 CT45A3Q8NHU0 189 aa12.63□□□□□ -0.39
SNF8-205ENST00000507302 ARPC1AQ92747 370 aa12.63□□□□□ -0.39
SNF8-205ENST00000507302 IGHV4OR15-8A0A075B7B6 117 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 A0A087WW49 117 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 MT-ND4P03905 459 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 RPSAP08865 295 aaKnown RBP12.62□□□□□ -0.39
SNF8-205ENST00000507302 ATP6V1E1P36543 226 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 POLR2IP36954 125 aaKnown RBP12.62□□□□□ -0.39
SNF8-205ENST00000507302 FLOT2Q14254 428 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 SRSF7Q16629 238 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNF8-205ENST00000507302 LINC00596Q86U02 117 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 SPATA24Q86W54 205 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 GAPTQ8N292 157 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 NPBQ8NG41 125 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 RITA1Q96K30 269 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 GABARAPL3Q9BY60 117 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 ST3GAL6Q9Y274 331 aa12.62□□□□□ -0.39
SNF8-205ENST00000507302 IGHV3-43A0A0B4J1X8 118 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 G3V2T6 193 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 ARPC1BO15143 372 aaKnown RBP12.61□□□□□ -0.39
SNF8-205ENST00000507302 NDUFA3O95167 84 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 IGHV3-43DP0DP04 118 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 MYF6P23409 242 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 BLVRBP30043 206 aaPredicted RBP12.61□□□□□ -0.39
SNF8-205ENST00000507302 RBM11P57052 281 aaKnown RBP12.61□□□□□ -0.39
SNF8-205ENST00000507302 MMDQ15546 238 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 ATP6AP1Q15904 470 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 HAGHQ16775 308 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 C5orf64Q2M2E5 130 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 SLC25A30Q5SVS4 291 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 OR10K1Q8NGX5 313 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 TNFAIP8L1Q8WVP5 186 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 CPNE2Q96FN4 548 aaPredicted RBP12.61□□□□□ -0.39
SNF8-205ENST00000507302 CIB1Q99828 191 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 THAP7Q9BT49 309 aaPredicted RBP12.61□□□□□ -0.39
SNF8-205ENST00000507302 RIBC2Q9H4K1 309 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 FBXO7Q9Y3I1 522 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 GMPPBQ9Y5P6 360 aa12.61□□□□□ -0.39
SNF8-205ENST00000507302 C12orf77C9JDV5 145 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 CNTFRP26992 372 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 ACTBP60709 375 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 NDPQ00604 133 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 RSU1Q15404 277 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 SGPP2Q8IWX5 399 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 ODF3L1Q8IXM7 274 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 TCTEX1D1Q8N7M0 179 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 OR51A2Q8NGJ7 313 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 UBALD1Q8TB05 177 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 ANKRD60Q9BZ19 345 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 PARP11Q9NR21 331 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 POMPQ9Y244 141 aa12.6□□□□□ -0.39
SNF8-205ENST00000507302 DAPL1A0PJW8 107 aa12.59□□□□□ -0.39
SNF8-205ENST00000507302 GEMIN2O14893 280 aaKnown RBP12.59□□□□□ -0.39
SNF8-205ENST00000507302 NBR2O15453 112 aa12.59□□□□□ -0.39
SNF8-205ENST00000507302 HSPB1P04792 205 aaKnown RBP12.59□□□□□ -0.39
SNF8-205ENST00000507302 GYS2P54840 703 aa12.59□□□□□ -0.39
SNF8-205ENST00000507302 PITPNAQ00169 270 aa12.59□□□□□ -0.39
SNF8-205ENST00000507302 MPV17LQ2QL34 196 aa12.59□□□□□ -0.39
SNF8-205ENST00000507302 OR52N1Q8NH53 320 aa12.59□□□□□ -0.39
SNF8-205ENST00000507302 TRUB1Q8WWH5 349 aaKnown RBP12.59□□□□□ -0.39
SNF8-205ENST00000507302 C4orf36Q96KX1 117 aa12.59□□□□□ -0.39
SNF8-205ENST00000507302 OR4C12Q96R67 309 aa12.59□□□□□ -0.39
SNF8-205ENST00000507302 CST11Q9H112 138 aa12.59□□□□□ -0.39
SNF8-205ENST00000507302 RCC2Q9P258 522 aaKnown RBP12.59□□□□□ -0.39
SNF8-205ENST00000507302 STUB1Q9UNE7 303 aa12.59□□□□□ -0.39
SNF8-205ENST00000507302 EXOGQ9Y2C4 368 aaKnown RBP12.59□□□□□ -0.39
SNF8-205ENST00000507302 NUBP2Q9Y5Y2 271 aa12.59□□□□□ -0.39
SNF8-205ENST00000507302 TMEM212A6NML5 194 aa12.58□□□□□ -0.4
SNF8-205ENST00000507302 OR7C1O76099 320 aaPredicted RBP12.58□□□□□ -0.4
SNF8-205ENST00000507302 HTR3BO95264 441 aa12.58□□□□□ -0.4
SNF8-205ENST00000507302 EGR2P11161 476 aaPredicted RBP12.58□□□□□ -0.4
SNF8-205ENST00000507302 RAB3AP20336 220 aa12.58□□□□□ -0.4
SNF8-205ENST00000507302 GNGT1P63211 74 aa12.58□□□□□ -0.4
SNF8-205ENST00000507302 LIN54Q6MZP7 749 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms