RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 ARL4DP49703 201 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 ARL16Q0P5N6 197 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 PRDX4Q13162 271 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 RTP5Q14D33 572 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 PINX1Q96BK5 328 aaKnown RBP14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 ANAPC16Q96DE5 110 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 RBM24Q9BX46 236 aaKnown RBP14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 OR51I2Q9H344 312 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 CCL28Q9NRJ3 127 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 OR7C1O76099 320 aaPredicted RBP14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 CNN1P51911 297 aaKnown RBP14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 CLEC12BQ2HXU8 276 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 OR10G3Q8NGC4 313 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 OR2T10Q8NGZ9 312 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 LMX1AQ8TE12 382 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 GPR146Q96CH1 333 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 ZNF385AQ96PM9 386 aaKnown RBP14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 METTL7AQ9H8H3 244 aa14.64□□□□□ -0.07
SQSTM1-211ENST00000506690 SCTP09683 121 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 FUT6P51993 359 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 ANKRD37Q7Z713 158 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 ZNF573Q86YE8 665 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 RPUSD4Q96CM3 377 aaKnown RBP14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 NAGKQ9UJ70 344 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 IFNL4K9M1U5 179 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 CNOT4O95628 575 aaKnown RBP14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 RPLP1P05386 114 aaKnown RBP14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 DRD1P21728 446 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 SRP14P37108 136 aaKnown RBP14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 ZNF92Q03936 586 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM27BQ5VT28 67 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 ZNF774Q6NX45 483 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 BTNL3Q6UXE8 466 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 HAPLN4Q86UW8 402 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 SMRP1Q8NCR6 262 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 EXTL1Q92935 676 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 PARLQ9H300 379 aa14.63□□□□□ -0.07
SQSTM1-211ENST00000506690 TRBV11-1A0A0K0K1C0 115 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 SYNGR3O43761 229 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 PGLYRP1O75594 196 aaPredicted RBP14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 NAPSAO96009 420 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 OR10J1P30954 320 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 OR3A1P47881 315 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 OR10J5Q8NHC4 309 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 LHX4Q969G2 390 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 PARD6GQ9BYG4 376 aaPredicted RBP14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 PLK3Q9H4B4 646 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 SPEGQ15772 3267 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 A0A1W2PPC4 97 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 NPSP0C0P6 89 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 F2RP25116 425 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 FKBP2P26885 142 aaKnown RBP14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 WDR61Q9GZS3 305 aaKnown RBP14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 IL17BQ9UHF5 180 aa14.62□□□□□ -0.07
SQSTM1-211ENST00000506690 LINC00614P0C842 121 aa14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 RPL29P47914 159 aaKnown RBP14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 RPP25LQ8N5L8 163 aaKnown RBP14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 MRPL30Q8TCC3 161 aaKnown RBP14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 ZNF837Q96EG3 531 aaPredicted RBP14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 WFIKKN1Q96NZ8 548 aa14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 SEMA5BQ9P283 1151 aa14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 MRPS18CQ9Y3D5 142 aaKnown RBP14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 LCATP04180 440 aa14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM69BQ5VUD6 431 aa14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 RHBDD2Q6NTF9 364 aa14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 Q6ZRM9 215 aa14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 CALHM1Q8IU99 346 aa14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 IMMP2LQ96T52 175 aa14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 SLC39A9Q9NUM3 307 aa14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 CD207Q9UJ71 328 aa14.61□□□□□ -0.07
SQSTM1-211ENST00000506690 IGKV1-6A0A0C4DH72 117 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 SYNGR2O43760 224 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 IGKV1D-33P01593 117 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 IGKV1-33P01594 117 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 LCN2P80188 198 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 TRIM61Q5EBN2 209 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FADS6Q8N9I5 356 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 Q8NFD4 153 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 BRWD1Q9NSI6 2320 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A10PA6NDY2 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A18PA6NE21 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A16PA6NEW6 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A20PA6NIJ5 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A8PA6NJQ4 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A7PA6NKC0 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A22PA8MWA6 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A12PA8MX19 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A5PA8MXJ8 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A23PA8MXZ1 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 C2CD4DB7Z1M9 353 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 TP53I11O14683 189 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 HPRT1P00492 218 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 IGLV3-19P01714 112 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A15PP0C7V4 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A13PP0C7W8 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A14PP0C7W9 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 FAM90A24PP0C7X0 464 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 IGFBP4P22692 258 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 PSMB3P49720 205 aa14.6□□□□□ -0.07
SQSTM1-211ENST00000506690 RPL15P61313 204 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms