RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 HTR1DP28221 377 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 CEACAM3P40198 252 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 CLDN12P56749 244 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 RPL15P61313 204 aaKnown RBP5.9□□□□□ -1.46
GYPB-206ENST00000506516 QRFPP83859 136 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 UNC119Q13432 240 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 AANATQ16613 207 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 C17orf58Q2M2W7 97 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 C6orf183Q5T699 404 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 MINOS1Q5TGZ0 78 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 PRAMEF5Q5TYX0 476 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 Q6ZTK2 550 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 FAM89BQ8N5H3 189 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.9□□□□□ -1.46
GYPB-206ENST00000506516 OR56B1Q8NGI3 324 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 OR13A1Q8NGR1 328 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 OR9G1Q8NH87 305 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 NDNFQ8TB73 568 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 MRGPRDQ8TDS7 321 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 DYRK2Q92630 601 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 ARL11Q969Q4 196 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 GFI1Q99684 422 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 SSX3Q99909 188 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 FAAP24Q9BTP7 215 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 LPAR5Q9H1C0 372 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 RIMS4Q9H426 269 aaPredicted RBP5.9□□□□□ -1.46
GYPB-206ENST00000506516 LINC00574Q9H8X3 128 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 ABCB10Q9NRK6 738 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 ZNF581Q9P0T4 197 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 ZNRD1Q9P1U0 126 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 MINOS1-NBL1R4GNA1 71 aa5.9□□□□□ -1.46
GYPB-206ENST00000506516 DOCK11Q5JSL3 2073 aa5.9□□□□□ -1.47
GYPB-206ENST00000506516 TRAV39A0A0B4J263 110 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 TMEM89A2RUT3 159 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 ODF3BA8MYP8 253 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 LEUTXA8MZ59 168 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 AIREO43918 545 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 TMEM127O75204 238 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 MMP23AO75900 390 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 IGHV4-59P01825 116 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 HKR1P10072 659 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 JUNBP17275 347 aaPredicted RBP5.89□□□□□ -1.47
GYPB-206ENST00000506516 CFPP27918 469 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 CHATP28329 748 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 CD34P28906 385 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 SDC2P34741 201 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 VEGFCP49767 419 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 ARHGDIBP52566 201 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 OR10A3P58181 314 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 MXD1Q05195 221 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 FOXL1Q12952 345 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 SSX2Q16385 188 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 LTC4SQ16873 150 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 LRRC75BQ2VPJ9 315 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 TMEM30BQ3MIR4 351 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 SIGIRRQ6IA17 410 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 C12orf54Q6X4T0 127 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 C6orf201Q7Z4U5 140 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 ZNF554Q86TJ5 538 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 GAPTQ8N292 157 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 PRR18Q8N4B5 295 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 DTX3Q8N9I9 347 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 OR52M1Q8NGK5 317 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 OR4K15Q8NH41 348 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 RFESDQ8TAC1 157 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 PTX4Q96A99 478 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 KIRREL1Q96J84 757 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 SULT4A1Q9BR01 284 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 CHIAQ9BZP6 476 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 CHMP1AQ9HD42 196 aaPredicted RBP5.89□□□□□ -1.47
GYPB-206ENST00000506516 RAB18Q9NP72 206 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 DPM3Q9P2X0 92 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 HSF4Q9ULV5 492 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 AMMECR1Q9Y4X0 333 aaPredicted RBP5.89□□□□□ -1.47
GYPB-206ENST00000506516 HILPDAQ9Y5L2 63 aa5.89□□□□□ -1.47
GYPB-206ENST00000506516 NAV3Q8IVL0 2385 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 JMJD1CQ15652 2540 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 TMEM272A0A1B0GTI8 110 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 FAM172BPA6NC97 362 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 TRIM64CA6NLI5 447 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 VGLL3A8MV65 326 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 OOSP1A8MZH6 123 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 C12orf77C9JDV5 145 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 C15orf65H3BRN8 121 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 BUB1B-PAK6H3BSN5 160 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 H3BUX3 64 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 J3QR06 171 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 SDCBPO00560 298 aaPredicted RBP5.88□□□□□ -1.47
GYPB-206ENST00000506516 LDLRAD4O15165 306 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 SOCS1O15524 211 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 GPR137BO60478 399 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 IGLV1-47P01700 117 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 BRS3P32247 399 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 SSTR5P35346 364 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 GDNFP39905 211 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 TMEM50BP56557 158 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 MRPS15P82914 257 aaKnown RBP5.88□□□□□ -1.47
GYPB-206ENST00000506516 ARL6IP1Q15041 203 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 CCDC144NLQ6NUI1 221 aa5.88□□□□□ -1.47
GYPB-206ENST00000506516 BAIAP2L2Q6UXY1 529 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms