RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 EPPINO95925 133 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 S100A9P06702 114 aaKnown RBP1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 IVLP07476 585 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 CPMP14384 443 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 UGT2B10P36537 528 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 OR10A3P58181 314 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 STX3Q13277 289 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 SKP2Q13309 424 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 OR10J3Q5JRS4 329 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 SDIM1Q6ZPB5 146 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 ZNF767PQ75MW2 155 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 MRPL52Q86TS9 123 aaKnown RBP1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 OR5D18Q8NGL1 313 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 SUN5Q8TC36 379 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 ZNF75CPQ92670 426 aaPredicted RBP1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 TXNDC17Q9BRA2 123 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 OR51E2Q9H255 320 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 ENPP5Q9UJA9 477 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 POFUT2Q9Y2G5 429 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 WASHC3Q9Y3C0 194 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 MTCH2Q9Y6C9 303 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 ADGRB3O60242 1522 aa1.45□□□□□ -2.18
TOPBP1-204ENST00000505804 PTPRKQ15262 1439 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 B4DEV8 164 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 CDK14O94921 469 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 SNAP29O95721 258 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 PSMA1P25786 263 aaKnown RBP1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 ZNF140P52738 457 aaPredicted RBP1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 BSPH1Q075Z2 132 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 HTR4Q13639 388 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 FLOT2Q14254 428 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 PSG3Q16557 428 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 MUC15Q8N387 334 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 OR11L1Q8NGX0 322 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 ZNRF2Q8NHG8 242 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 TTTY12Q9BZ98 90 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 AGPAT3Q9NRZ7 376 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 SLIT2O94813 1529 aa1.44□□□□□ -2.18
TOPBP1-204ENST00000505804 SYNRGQ9UMZ2 1314 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 MUC6Q6W4X9 2439 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 LOC100506127A0A0U1RQW1 187 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 A0A1B0GX12 115 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 BOLA2-SMG1P6H3BVE0 249 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 SGCEO43556 437 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 DENRO43583 198 aaKnown RBP1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 TRAPPC3O43617 180 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 RAB36O95755 333 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 OR4A8P0C604 315 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 ATF1P18846 271 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 ACTR1BP42025 376 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 C1QTNF8P60827 252 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 RAB31Q13636 194 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 PAFAH1B3Q15102 231 aaKnown RBP1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 Q3ZCU0 254 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 FAM229BQ4G0N7 80 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 EBLN2Q6P2I7 272 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 TMEM25Q86YD3 366 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 ZFAND2AQ8N6M9 145 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 GTF2H4Q92759 462 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 GALMQ96C23 342 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 CCDC124Q96CT7 223 aaKnown RBP1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 DMAC2Q9NW81 257 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 HEY1Q9Y5J3 304 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 MPDZO75970 2070 aa1.43□□□□□ -2.18
TOPBP1-204ENST00000505804 ADAMTSL1Q8N6G6 1762 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 A0A0J9YX75 114 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 VPS37CA5D8V6 355 aaPredicted RBP1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 KNCNA6PVL3 124 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 EFCAB9A8MZ26 197 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 LY6LH3BQJ8 138 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 GPR171O14626 319 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 TNFAIP8O95379 198 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 APOA1P02647 267 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 ZNF7P17097 686 aaPredicted RBP1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 RCVRNP35243 200 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 GABRA4P48169 554 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 GABARAPL2P60520 117 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 HES1Q14469 280 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 SS18Q15532 418 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 ZBTB8OSQ8IWT0 167 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 ERMNQ8TAM6 284 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 EBNA1BP2Q99848 306 aaKnown RBP1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 ZNF251Q9BRH9 671 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 XKR8Q9H6D3 395 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 C11orf49Q9H6J7 331 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 METTL17Q9H7H0 456 aaPredicted RBP1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 MINOS1-NBL1R4GNA1 71 aa1.42□□□□□ -2.18
TOPBP1-204ENST00000505804 CHD2O14647 1828 aaKnown RBP1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 ERICH4A6NGS2 130 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 FNDC10F2Z333 226 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 S1PR2O95136 353 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 SOD1P00441 154 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 TPM1P09493 284 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 CTSEP14091 401 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 SPAM1P38567 509 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 MAGEA6P43360 314 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 SULT1A2P50226 295 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 OR2B6P58173 313 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 PDGFRLQ15198 375 aa1.41□□□□□ -2.18
TOPBP1-204ENST00000505804 VN1R4Q7Z5H5 301 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms