RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ATXN7L3Q14CW9 347 aaPredicted RBP6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 FAM120AOSQ5T036 256 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 BATF2Q8N1L9 274 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 HDHD3Q9BSH5 251 aaPredicted RBP6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 ATG5Q9H1Y0 275 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 OR14J1Q9UGF5 321 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 IGHV2-26A0A0B4J1V2 119 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 FGF2P09038 288 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 GABRA2P47869 451 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 ZNF134P52741 427 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 GUCA2AQ02747 115 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 PYHIN1Q6K0P9 492 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 CNIH2Q6PI25 160 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 OVCH2Q7RTZ1 564 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 TMEM86BQ8N661 226 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 TMEM229BQ8NBD8 167 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 TRGV10A0A0A0MS01 117 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 PROP1O75360 226 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 CCL3L1P16619 93 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 ERVFRD-1P60508 538 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 KLF9Q13886 244 aaPredicted RBP6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 OR52W1Q6IF63 320 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 GDPD3Q7L5L3 318 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 TMEM185AQ8NFB2 350 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 DDB2Q92466 427 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 ZNF48Q96MX3 618 aaPredicted RBP6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 NEDD4LQ96PU5 975 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 PCGF1Q9BSM1 259 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 IFI27L2Q9H2X8 130 aa6.72□□□□□ -1.33
CDC42SE2-208ENST00000505065 ANKRD20A5PA0PJZ0 165 aa6.71□□□□□ -1.33
CDC42SE2-208ENST00000505065 LANCL1O43813 399 aa6.71□□□□□ -1.33
CDC42SE2-208ENST00000505065 HBZP02008 142 aa6.71□□□□□ -1.33
CDC42SE2-208ENST00000505065 ZNF44P15621 663 aa6.71□□□□□ -1.33
CDC42SE2-208ENST00000505065 RCVRNP35243 200 aa6.71□□□□□ -1.33
CDC42SE2-208ENST00000505065 KRTAP21-3Q3LHN1 58 aa6.71□□□□□ -1.33
CDC42SE2-208ENST00000505065 GIMAP1Q8WWP7 306 aa6.71□□□□□ -1.33
CDC42SE2-208ENST00000505065 SMR3AQ99954 134 aa6.71□□□□□ -1.33
CDC42SE2-208ENST00000505065 GSX1Q9H4S2 264 aaPredicted RBP6.71□□□□□ -1.33
CDC42SE2-208ENST00000505065 ZNF580Q9UK33 172 aa6.71□□□□□ -1.33
CDC42SE2-208ENST00000505065 NUP50Q9UKX7 468 aa6.71□□□□□ -1.33
CDC42SE2-208ENST00000505065 RCC1P18754 421 aaPredicted RBP6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 BTNL3Q6UXE8 466 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 THNSL2Q86YJ6 484 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 IZUMO1Q8IYV9 350 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 RAB9BQ9NP90 201 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 PLEKHJ1Q9NW61 149 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 ANXA10Q9UJ72 324 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 A0A0A6YYJ9 748 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 TOX4O94842 621 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 SSTR5P35346 364 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 UCP3P55916 312 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 HLA-DRB5Q30154 266 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 Q6YL49 198 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 BOLLQ8N9W6 283 aaKnown RBP6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 MCFD2Q8NI22 146 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 DIABLOQ9NR28 239 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 FAM212BQ9NTI7 297 aaPredicted RBP6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 NAV2Q8IVL1 2488 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 ISPDA4D126 451 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 OCMP0CE72 109 aaPredicted RBP6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 MECP2P51608 486 aaKnown RBP6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZNF45Q02386 682 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 KLK9Q2XQG4 91 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 DCAF12L2Q5VW00 463 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 WIPF2Q8TF74 440 aaPredicted RBP6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZMAT3Q9HA38 289 aaKnown RBP6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 KLK9Q9UKQ9 250 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 AUP1Q9Y679 476 aa6.71□□□□□ -1.34
CDC42SE2-208ENST00000505065 ROS1P08922 2347 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 MED13LQ71F56 2210 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 A0A1W2PPI3 338 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 TMEM235A6NFC5 223 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 A8MV72 311 aaPredicted RBP6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 J3QR06 171 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 IL6RP08887 468 aaPredicted RBP6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 IGHV4-38-2P0DP08 117 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 BRICD5Q6PL45 260 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 MAPK1IP1LQ8NDC0 245 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 MYO9AB2RTY4 2548 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 UBE2QL1A1L167 161 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 BUB1B-PAK6H3BSN5 160 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 KIR2DS4P43632 304 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 LSAMPQ13449 338 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 KIR2DS1Q14954 304 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 CT45A1Q5HYN5 189 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 Q8N2B8 174 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 CT45A3Q8NHU0 189 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 TAF9BQ9HBM6 251 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZNRD1Q9P1U0 126 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 CDC42EP3Q9UKI2 254 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 KCNS2Q9ULS6 477 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 USF3Q68DE3 2245 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 CTXN2P0C2S0 81 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 BTCP35070 178 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 DYRK1AQ13627 763 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 TMEM69Q5SWH9 247 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 AADACL3Q5VUY0 350 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 ZNF565Q8N9K5 539 aa6.7□□□□□ -1.34
CDC42SE2-208ENST00000505065 OR5AP2Q8NGF4 316 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms