RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 TMEM50BP56557 158 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 PLAC9Q5JTB6 97 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 HACD4Q5VWC8 232 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 TRIQKQ629K1 86 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 SIGIRRQ6IA17 410 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 TREML4Q6UXN2 200 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 OR5D13Q8NGL4 314 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 TRIM63Q969Q1 353 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 SDSLQ96GA7 329 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 ARHGAP5-AS1Q96IT6 56 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 ZNRD1Q9P1U0 126 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 IL36RNQ9UBH0 155 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 GLS2Q9UI32 602 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 PKD1L1Q8TDX9 2849 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 A0A1W2PPH5 198 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 LPLP06858 475 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 FUT3P21217 361 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 PRDX2P32119 198 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 PRSS3P35030 304 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 SAA4P35542 130 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 SNU13P55769 128 aaKnown RBP14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 DGCR2P98153 550 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 SSBP1Q04837 148 aaKnown RBP14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 NKAPLQ5M9Q1 402 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 BRICD5Q6PL45 260 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 OR8H2Q8N162 312 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 PNKDQ8N490 385 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 ZNF561Q8N587 486 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 WFDC12Q8WWY7 111 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 TNFRSF14Q92956 283 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 PECRQ9BY49 303 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 SEBOXQ9HB31 216 aaPredicted RBP14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 PLEKHJ1Q9NW61 149 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 OR14J1Q9UGF5 321 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 RNF114Q9Y508 228 aa14.7□□□□□ -0.06
SQSTM1-209ENST00000504627 GLAP06280 429 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 GNB3P16520 340 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 GNG2P59768 71 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 SRSF4Q08170 494 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 BAK1Q16611 211 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 CDNFQ49AH0 187 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 DHRS7BQ6IAN0 325 aaPredicted RBP14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 CD177Q8N6Q3 437 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 OR52I2Q8NH67 350 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 GPX8Q8TED1 209 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 FCAMRQ8WWV6 532 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 ABCB10Q9NRK6 738 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 C19orf12Q9NSK7 152 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 KCNK7Q9Y2U2 307 aa14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 RBMX2Q9Y388 322 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-209ENST00000504627 HAND1O96004 215 aa14.68□□□□□ -0.06
SQSTM1-209ENST00000504627 CEBPDP49716 269 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-209ENST00000504627 ACTBP60709 375 aa14.68□□□□□ -0.06
SQSTM1-209ENST00000504627 RPL31P62899 125 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-209ENST00000504627 Q6P435 159 aa14.68□□□□□ -0.06
SQSTM1-209ENST00000504627 C6orf201Q7Z4U5 140 aa14.68□□□□□ -0.06
SQSTM1-209ENST00000504627 OR5R1Q8NH85 324 aa14.68□□□□□ -0.06
SQSTM1-209ENST00000504627 LINC01006Q8NI28 216 aa14.68□□□□□ -0.06
SQSTM1-209ENST00000504627 THAP7Q9BT49 309 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-209ENST00000504627 VPREB3Q9UKI3 123 aa14.68□□□□□ -0.06
SQSTM1-209ENST00000504627 hCG_1809904A0A1W2PP81 198 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 A0A1W2PPE2 198 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 A0A1W2PR64 198 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 A0A1W2PRV1 198 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 SH2D1BO14796 132 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 OR2H2O95918 312 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 PTHLHP12272 177 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 ZNF44P15621 663 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 SCN1BQ07699 218 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 RNASE12Q5GAN4 147 aaKnown RBP14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 ATAD3CQ5T2N8 411 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 STEAP3Q658P3 488 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 RTN4RL2Q86UN3 420 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 LYSMD2Q8IV50 215 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 ZNF581Q9P0T4 197 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 MTFP1Q9UDX5 166 aa14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 ZNF107Q9UII5 783 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-209ENST00000504627 TRAV24A0A0B4J272 114 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 DEGS1O15121 323 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 CD3GP09693 182 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 DUSP1P28562 367 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 RCVRNP35243 200 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 GDNFP39905 211 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 CBX5P45973 191 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 INPP1P49441 399 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 AP3S2P59780 193 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 IFITM3Q01628 133 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 ARFRP1Q13795 201 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 RBM39Q14498 530 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 Q6ZSV7 163 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 SETD6Q8TBK2 473 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 NUDCD2Q8WVJ2 157 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 DEDD2Q8WXF8 326 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 SULT4A1Q9BR01 284 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 HEXA-AS1Q9H8Q6 139 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 TAS2R8Q9NYW2 309 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 ANAPC10Q9UM13 185 aa14.66□□□□□ -0.06
SQSTM1-209ENST00000504627 MCRIP1C9JLW8 97 aa14.65□□□□□ -0.06
SQSTM1-209ENST00000504627 SLC33A1O00400 549 aaPredicted RBP14.65□□□□□ -0.06
SQSTM1-209ENST00000504627 RBBP9O75884 186 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms