RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 RPL36A-HNRNPH2H7BZ11 118 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 PITX3O75364 302 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 PDGFBP01127 241 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-208ENST00000504387 SERPINE2P07093 398 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 PSG2P11465 335 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 MAS1LP35410 378 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 TNFSF10P50591 281 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 TAS2R30P59541 319 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 SLC35B1P78383 322 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 C17orf67Q0P5P2 114 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 EXT1Q16394 746 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 Q6ZRM9 215 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 ATOH7Q8N100 152 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 CCDC71LQ8N9Z2 235 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 OR10V1Q8NGI7 309 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 PLPPR1Q8TBJ4 325 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 NOL4LQ96MY1 436 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-208ENST00000504387 MRPL13Q9BYD1 178 aaKnown RBP6.55□□□□□ -1.36
NEDD9-208ENST00000504387 MYOTQ9UBF9 498 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 CACNG5Q9UF02 275 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 KCNS2Q9ULS6 477 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 ANAPC10Q9UM13 185 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 CACNA1GO43497 2377 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 PRR14LQ5THK1 2151 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 A0A1B0GX78 115 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 SIRPB1O00241 398 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 SIAH2O43255 324 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 TRAF3IP2O43734 574 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-208ENST00000504387 SCRG1O75711 98 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 TIAF1O95411 115 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 HPRT1P00492 218 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 OPN1MWP04001 364 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 OPN1MW2P0DN77 364 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 OPN1MW3P0DN78 364 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 RSPO1Q2MKA7 263 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-208ENST00000504387 TMEM41BQ5BJD5 291 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 ASPHD1Q5U4P2 390 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 VASH2Q86V25 355 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 OSR2Q8N2R0 312 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 RAB24Q969Q5 203 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 GNPNAT1Q96EK6 184 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-208ENST00000504387 CCDC74BQ96LY2 380 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 DERL1Q9BUN8 251 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 C8orf33Q9H7E9 229 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-208ENST00000504387 RYDENQ9NUL5 291 aaKnown RBP6.55□□□□□ -1.36
NEDD9-208ENST00000504387 RNF24Q9Y225 148 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 EML6Q6ZMW3 1958 aa6.55□□□□□ -1.36
NEDD9-208ENST00000504387 SPTBN2O15020 2390 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-208ENST00000504387 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-208ENST00000504387 MKRN2OSH3BPM6 223 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 DLEU1O43261 78 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 PAGE4O60829 102 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 NRASP01111 189 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 HBE1P02100 147 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 CDKN1AP38936 164 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 RPL23P62829 140 aaKnown RBP6.54□□□□□ -1.36
NEDD9-208ENST00000504387 IQCJQ1A5X6 159 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 PLPPR2Q96GM1 343 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 TMEM222Q9H0R3 208 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 PARLQ9H300 379 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 NAGKQ9UJ70 344 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 RNF150Q9ULK6 438 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 TRAPPC1Q9Y5R8 145 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 IGHV1OR21-1A0A087WYE8 117 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 NPIPA2E9PIF3 369 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 NPIPA3F8WFD2 350 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 WDR1O75083 606 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 TK1P04183 234 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 CFIP05156 583 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 ERVFC1-1P60608 527 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 KRTDAPP60985 99 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 SRYQ05066 204 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 ENDOGQ14249 297 aaKnown RBP6.54□□□□□ -1.36
NEDD9-208ENST00000504387 MCEMP1Q8IX19 187 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF709Q8N972 641 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 OR2T10Q8NGZ9 312 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 EXTL1Q92935 676 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 GPR146Q96CH1 333 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 ADGRG7Q96K78 797 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 ULBP2Q9BZM5 246 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 OR51I2Q9H344 312 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 SRD5A3Q9H8P0 318 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 ALKBH4Q9NXW9 302 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 PSENENQ9NZ42 101 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 FBLN5Q9UBX5 448 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 IGHV1OR15-9A0A0B4J2B8 117 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 F2Z2F3 143 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 TLX3O43711 291 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-208ENST00000504387 IGKV1D-33P01593 117 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 IGKV1-33P01594 117 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 RPLP1P05386 114 aaKnown RBP6.54□□□□□ -1.36
NEDD9-208ENST00000504387 FRMD6-AS1P0C7T7 363 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 ZNF133P52736 654 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-208ENST00000504387 PAX9P55771 341 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 LPAL2Q16609 132 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 KIAA1644Q3SXP7 199 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 FAM53AQ6NSI3 398 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-208ENST00000504387 SLC23A3Q6PIS1 610 aa6.54□□□□□ -1.36
NEDD9-208ENST00000504387 C11orf42Q8N5U0 333 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms