RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 GSTP1P09211 210 aaKnown RBP9.06□□□□□ -0.96
VCAN-205ENST00000503923 ZNF182P17025 639 aaPredicted RBP9.06□□□□□ -0.96
VCAN-205ENST00000503923 SAA4P35542 130 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 SOX6P35712 828 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 SPCS2Q15005 226 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 LTC4SQ16873 150 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 DEFB112Q30KQ8 113 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 CDNFQ49AH0 187 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 OLFML2AQ68BL7 652 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 ZNF626Q68DY1 528 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 MZT2AQ6P582 158 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 ZNF880Q6PDB4 577 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 BAIAP2L2Q6UXY1 529 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 PRIMA1Q86XR5 153 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 PRR18Q8N4B5 295 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 SAMD12Q8N8I0 201 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 SETD6Q8TBK2 473 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 ZNF596Q8TC21 504 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 ZDHHC16Q969W1 377 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 S100A16Q96FQ6 103 aaKnown RBP9.06□□□□□ -0.96
VCAN-205ENST00000503923 CMTM3Q96MX0 182 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 ZNF48Q96MX3 618 aaPredicted RBP9.06□□□□□ -0.96
VCAN-205ENST00000503923 PRDM13Q9H4Q3 707 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 ZMAT3Q9HA38 289 aaKnown RBP9.06□□□□□ -0.96
VCAN-205ENST00000503923 TAF9BQ9HBM6 251 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 DIABLOQ9NR28 239 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 TBL2Q9Y4P3 447 aaKnown RBP9.06□□□□□ -0.96
VCAN-205ENST00000503923 CUBNO60494 3623 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 MDFIC2A0A1B0GVS7 189 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 FAM172BPA6NC97 362 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 CCDC160A6NGH7 325 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 H3BMQ9 156 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 SDCBPO00560 298 aaPredicted RBP9.05□□□□□ -0.96
VCAN-205ENST00000503923 TOR1AO14656 332 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 HBZP02008 142 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 FBP1P09467 338 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 PRRX1P54821 245 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 HILS1P60008 231 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 ARFRP1Q13795 201 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 HMGN3Q15651 99 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 ZNF260Q3ZCT1 412 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 MINOS1Q5TGZ0 78 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 BEND2Q8NDZ0 799 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 OR9G1Q8NH87 305 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 OR1L1Q8NH94 360 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 UBALD1Q8TB05 177 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 HDHD3Q9BSH5 251 aaPredicted RBP9.05□□□□□ -0.96
VCAN-205ENST00000503923 ZNF286AQ9HBT8 521 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 Q9N2K0 584 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 GFOD1Q9NXC2 390 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 COMMD3Q9UBI1 195 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 MINOS1-NBL1R4GNA1 71 aa9.05□□□□□ -0.96
VCAN-205ENST00000503923 TRAV18A0A075B6X5 111 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 TMEM235A6NFC5 223 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 J3QR06 171 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 IGLV1-47P01700 117 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 APOA1P02647 267 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 HTR1DP28221 377 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 TALDO1P37837 337 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 LOXL3P58215 753 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 GNG2P59768 71 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 HLA-DRB3P79483 266 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 HTD2P86397 168 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 PITPNAQ00169 270 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 BAMBIQ13145 260 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 PNLIPRP3Q17RR3 467 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 Q3ZCU0 254 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 HACD4Q5VWC8 232 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 Q6YL49 198 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 Q6ZPA2 131 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 LDLRAD3Q86YD5 345 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 OR4P4Q8NGL7 312 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 DYNC2LI1Q8TCX1 351 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 CREB3L1Q96BA8 519 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 GALMQ96C23 342 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 MALSU1Q96EH3 234 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 RBM38Q9H0Z9 239 aaKnown RBP9.04□□□□□ -0.96
VCAN-205ENST00000503923 OR2S2Q9NQN1 319 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 CCDC59Q9P031 241 aaKnown RBP9.04□□□□□ -0.96
VCAN-205ENST00000503923 ZNRD1Q9P1U0 126 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 GNG12Q9UBI6 72 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 RSL24D1Q9UHA3 163 aaKnown RBP9.04□□□□□ -0.96
VCAN-205ENST00000503923 JPT1Q9UK76 154 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 PSG11Q9UQ72 335 aa9.04□□□□□ -0.96
VCAN-205ENST00000503923 IGHV3-43A0A0B4J1X8 118 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 ZNF701M0R085 212 aaPredicted RBP9.03□□□□□ -0.96
VCAN-205ENST00000503923 XRCC3O43542 346 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 MELTFP08582 738 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 FCGR3AP08637 254 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 IGHV3-43DP0DP04 118 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 DTYMKP23919 212 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 MNDAP41218 407 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 KIR2DS4P43632 304 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 GNG10P50151 68 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 KIR2DS1Q14954 304 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 SRSF7Q16629 238 aaKnown RBP eCLIP9.03□□□□□ -0.96
VCAN-205ENST00000503923 HLA-DRB5Q30154 266 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 UTF1Q5T230 341 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 STEAP3Q658P3 488 aa9.03□□□□□ -0.96
VCAN-205ENST00000503923 LHFPL4Q7Z7J7 247 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms