RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 TMEM229BQ8NBD8 167 aa16.77■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR4A4PQ8NGN8 299 aa16.77■□□□□ 0.27
CDC42SE2-206ENST00000503291 GALMQ96C23 342 aa16.77■□□□□ 0.27
CDC42SE2-206ENST00000503291 MSI2Q96DH6 328 aaKnown RBP16.77■□□□□ 0.27
CDC42SE2-206ENST00000503291 ABCB10Q9NRK6 738 aa16.77■□□□□ 0.27
CDC42SE2-206ENST00000503291 ONECUT1Q9UBC0 465 aa16.77■□□□□ 0.27
CDC42SE2-206ENST00000503291 ZANQ9Y493 2812 aa16.77■□□□□ 0.27
CDC42SE2-206ENST00000503291 WNK2Q9Y3S1 2297 aa16.76■□□□□ 0.27
CDC42SE2-206ENST00000503291 IGKV1-6A0A0C4DH72 117 aa16.76■□□□□ 0.27
CDC42SE2-206ENST00000503291 ANKRD20A5PA0PJZ0 165 aa16.76■□□□□ 0.27
CDC42SE2-206ENST00000503291 CD3DP04234 171 aa16.76■□□□□ 0.27
CDC42SE2-206ENST00000503291 IGHV4-31P0DP07 118 aa16.76■□□□□ 0.27
CDC42SE2-206ENST00000503291 ARPC4P59998 168 aa16.76■□□□□ 0.27
CDC42SE2-206ENST00000503291 HERPUD1Q15011 391 aa16.76■□□□□ 0.27
CDC42SE2-206ENST00000503291 TOMM5Q8N4H5 51 aa16.76■□□□□ 0.27
CDC42SE2-206ENST00000503291 ZNF107Q9UII5 783 aaPredicted RBP16.76■□□□□ 0.27
CDC42SE2-206ENST00000503291 FLNAP21333 2647 aaKnown RBP16.76■□□□□ 0.27
CDC42SE2-206ENST00000503291 C17orf98A8MV24 154 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 SMAD7O15105 426 aaKnown RBP16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 UPK1BO75841 260 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 MMP23AO75900 390 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 HRH1P35367 487 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 RFX2P48378 723 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 INPP1P49441 399 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 TAS2R19P59542 299 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 LTC4SQ16873 150 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 ZNF57Q68EA5 555 aaPredicted RBP16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 BTNL3Q6UXE8 466 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 HEPN1Q6WQI6 88 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 INSIG2Q9Y5U4 225 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 TEX15Q9BXT5 2789 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 ZNF469Q96JG9 3925 aaPredicted RBP16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 PMP2P02689 132 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 RAB9BQ9NP90 201 aa16.75■□□□□ 0.27
CDC42SE2-206ENST00000503291 CYSRT1A8MQ03 144 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 F2RL2O00254 374 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 FPR2P25090 351 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR3A3P47888 321 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 GZMKP49863 264 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 DVL1P1P54792 670 aaPredicted RBP16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 TAS2R46P59540 309 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 IFITM3Q01628 133 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 KLF9Q13886 244 aaPredicted RBP16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 PRAMEF5Q5TYX0 476 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 STEAP1BQ6NZ63 245 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 Q8N7P7 452 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR5H2Q8NGV7 314 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 TMEM186Q96B77 213 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 HIF1ANQ9NWT6 349 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 IDI2-AS1Q9NZ38 188 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 SLC23A1Q9UHI7 598 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 TRAV20A0A0B4J274 112 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 M0QYG6 137 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 BET1O15155 118 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 TGFAP01135 160 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 HTD2P86397 168 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 CDK10Q15131 360 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 FAM53AQ6NSI3 398 aaPredicted RBP16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 OVCH2Q7RTZ1 564 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR4D10Q8NGI6 311 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 BORCS5Q969J3 196 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 CABLES2Q9BTV7 478 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR2S2Q9NQN1 319 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 NECAP2Q9NVZ3 263 aa16.74■□□□□ 0.27
CDC42SE2-206ENST00000503291 LINC00854A0A1B0GVQ3 168 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 hCG_1809904A0A1W2PP81 198 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 A0A1W2PPE2 198 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 A0A1W2PR64 198 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 A0A1W2PRV1 198 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 M0R1W7 72 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 SDCBPO00560 298 aaPredicted RBP16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 CD74P04233 296 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 CTXN2P0C2S0 81 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 LOXL3P58215 753 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 AP3S2P59780 193 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 KIR3DL3Q8N743 410 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR52L2PQ8NGH6 319 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR1A1Q9P1Q5 309 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 KPTNQ9Y664 436 aa16.73■□□□□ 0.27
CDC42SE2-206ENST00000503291 IGHV3-43A0A0B4J1X8 118 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 RAB3DO95716 219 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 RBP4P02753 201 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 AKAIN1P0CW23 69 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 IGHV1-8P0DP01 117 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 IGHV3-43DP0DP04 118 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 NFYBP25208 207 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 RNASE10Q5GAN6 216 aaKnown RBP16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 DCAF12L2Q5VW00 463 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 STEAP3Q658P3 488 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 C1orf122Q6ZSJ8 110 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR10A7Q8NGE5 316 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR10J5Q8NHC4 309 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 TINAGL1Q9GZM7 467 aaPredicted RBP16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 EHFQ9NZC4 300 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 TRBV6-7A0A0A0MS04 114 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 HSPA12AO43301 675 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 OR5H8P0DN80 308 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 TBPP20226 339 aa16.72■□□□□ 0.27
CDC42SE2-206ENST00000503291 ZBTB25P24278 435 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms