RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 TNFRSF10CO14798 259 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 DHHO43323 396 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF354AO60765 605 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 TRAPPC6AO75865 159 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 SOX14O95416 240 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 CYB5AP00167 134 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 MT-CO3P00414 261 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 APOA2P02652 100 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 GAPDHP04406 335 aaKnown RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 CELA2AP08217 269 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 IL3P08700 152 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 CELA3AP09093 270 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 CT45A10P0DMU9 189 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 CD58P19256 250 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 PGCP20142 388 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 PPIBP23284 216 aaKnown RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 SIRPAP78324 504 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 CYCSP99999 105 aaKnown RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 EXOSC7Q15024 291 aaKnown RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 MLF2Q15773 248 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 PMCHL1Q16048 86 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 DUSP5Q16690 384 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 RSPO4Q2I0M5 234 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF648Q5T619 568 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 SLC18B1Q6NT16 456 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF474Q6S9Z5 364 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 CBLN3Q6UW01 205 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 GLIPR1L1Q6UWM5 242 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF66Q6ZN08 573 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 Q6ZRG5 221 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 Q6ZSR9 355 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 MARCH9Q86YJ5 346 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 PHYKPLQ8IUZ5 450 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 SAXO1Q8IYX7 474 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 CISD2Q8N5K1 135 aaKnown RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 KRTCAP2Q8N6L1 136 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 IQCF1Q8N6M8 205 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 IL22RA1Q8N6P7 574 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 SUMF1Q8NBK3 374 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 LRRC15Q8TF66 581 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 NDRG1Q92597 394 aaKnown RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 DNAJC19Q96DA6 116 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 STARD4Q96DR4 205 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 TSSK2Q96PF2 358 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 GPER1Q99527 375 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 NIPSNAP3BQ9BS92 247 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 LRRC61Q9BV99 259 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 C1orf43Q9BWL3 253 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 EBPLQ9BY08 206 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 PLA2G2FQ9BZM2 168 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 EIF5A2Q9GZV4 153 aaKnown RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 NPVFQ9HCQ7 196 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 SPANXB1Q9NS25 103 aaPredicted RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 SCML2Q9UQR0 700 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 INSL5Q9Y5Q6 135 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 GCN1Q92616 2671 aaKnown RBP5.62□□□□□ -1.51
CLCN3-203ENST00000502998 TSC2P49815 1807 aa5.62□□□□□ -1.51
CLCN3-203ENST00000502998 LOC400499M0QZD8 3231 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 KBTBD11-OT1A0A1B0GTJ5 212 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 SHISA7A6NL88 538 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 CD300LBA8K4G0 201 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 NPIPB5A8MRT5 1133 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 J3QLI3 93 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 M0QZQ0 153 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 NCKAP5O14513 1909 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 NBR2O15453 112 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 NPIPB7O75200 414 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 FCN3O75636 299 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 OR2J3O76001 311 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 SFT2D2O95562 160 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 CER1O95813 267 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 GPANK1O95872 356 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 MOSP00540 346 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 APOC2P02655 101 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 HSPB1P04792 205 aaKnown RBP5.61□□□□□ -1.51
CLCN3-203ENST00000502998 REG1AP05451 166 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 CELA2BP08218 269 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-203ENST00000502998 SP9P0CG40 484 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 VSIG10L2P0DP72 767 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 MMP9P14780 707 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF17P17021 662 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 CSRP1P21291 193 aaKnown RBP5.61□□□□□ -1.51
CLCN3-203ENST00000502998 LMO1P25800 156 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 SRIP30626 198 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 TIA1P31483 386 aaKnown RBP eCLIP5.61□□□□□ -1.51
CLCN3-203ENST00000502998 PYCR1P32322 319 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 CCR2P41597 374 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 CSRP3P50461 194 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF83P51522 516 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 POLR2JP52435 117 aaKnown RBP5.61□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF133P52736 654 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-203ENST00000502998 MANFP55145 182 aaKnown RBP5.61□□□□□ -1.51
CLCN3-203ENST00000502998 YPEL3P61236 119 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-203ENST00000502998 GUCA2AQ02747 115 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 AKAP13Q12802 2813 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 LINC00303Q3SY05 128 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 CXorf66Q5JRM2 361 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-203ENST00000502998 ACTL10Q5JWF8 245 aa5.61□□□□□ -1.51
CLCN3-203ENST00000502998 UBE2NLQ5JXB2 153 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms