RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 SPCS3P61009 180 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 RAB4BP61018 213 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 SELENOTP62341 195 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 RPL19P84098 196 aaKnown RBP3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 BIKQ13323 160 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 KRR1Q13601 381 aaKnown RBP3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 MAPK14Q16539 360 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 NRF1Q16656 503 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC25A35Q3KQZ1 300 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 SYT6Q5T7P8 510 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 RUSC1-AS1Q66K80 236 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 LCN12Q6JVE5 192 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 C19orf48Q6RUI8 117 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 CYHR1Q6ZMK1 362 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 DNM1P46Q6ZS02 220 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 RNF165Q6ZSG1 346 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 ARPINQ7Z6K5 226 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 LGI3Q8N145 548 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC22A18ASQ8N1D0 253 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 AQP11Q8NBQ7 271 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 CHST4Q8NCG5 386 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 GPR26Q8NDV2 337 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR10AD1Q8NGE0 317 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR4C13Q8NGP0 309 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR9G1Q8NH87 305 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 PIFOQ8TCI5 191 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZFP90Q8TF47 636 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 BLNKQ8WV28 456 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 C10orf82Q8WW14 230 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 RERGQ96A58 199 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF524Q96C55 264 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF597Q96LX8 424 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF382Q96SR6 550 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 HIST1H4GQ99525 98 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 TEAD3Q99594 435 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 PHB2Q99623 299 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 NIPSNAP1Q9BPW8 284 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 THTPAQ9BU02 230 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 PECRQ9BY49 303 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLIRPQ9GZT3 109 aaKnown RBP3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 PARLQ9H300 379 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 FBXL12Q9NXK8 326 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 VNN3Q9NY84 501 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 TAS2R1Q9NYW7 299 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 XCL2Q9UBD3 114 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 VPS29Q9UBQ0 182 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 MTFP1Q9UDX5 166 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 MOKQ9UQ07 419 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 C14orf166Q9Y224 244 aaKnown RBP3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 VSIG4Q9Y279 399 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 CACNA1BQ00975 2339 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 CACNA1GO43497 2377 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 DOCK4Q8N1I0 1966 aa3.34□□□□□ -1.88
HMGB1P21-201ENST00000502313 RELNP78509 3460 aa3.34□□□□□ -1.88
HMGB1P21-201ENST00000502313 BOD1L1Q8NFC6 3051 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 IGLV3-16A0A075B6K0 115 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 TRAV8-4A0A0B4J246 113 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 A0A1W2PP18 115 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR51F1A6NGY5 319 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 A8MT66 165 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 J3QT63 122 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 TXNDC9O14530 226 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR1I1O60431 355 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 UGT2B11O75310 529 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 RP2O75695 350 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 NTN1O95631 604 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 P01737 135 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 IGHV4-34P06331 123 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 SLC35G6P0C7Q6 338 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 LINC00032P0C843 101 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 CTSEP14091 401 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 PLA2G2AP14555 144 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 PAX6P26367 422 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 AK4P27144 223 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 TSPOP30536 169 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 DRD3P35462 400 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 POLR2JP52435 117 aaKnown RBP3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 MTPNP58546 118 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 ELF3P78545 371 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 RPL36AP83881 106 aaKnown RBP3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 CYCSP99999 105 aaKnown RBP3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 FZD2Q14332 565 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 IHHQ14623 411 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 TSNQ15631 228 aaKnown RBP3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 CST6Q15828 149 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 LRRC75BQ2VPJ9 315 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF718Q3SXZ3 478 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 HENMT1Q5T8I9 393 aaKnown RBP3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 C1orf146Q5VVC0 180 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 TRIQKQ629K1 86 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 DHRS4L2Q6PKH6 230 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 UNQ9370/PRO34162Q6UXP9 181 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZCCHC23Q6ZST2 131 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 COMMD7Q86VX2 200 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 SKA3Q8IX90 412 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 GATD1Q8NB37 220 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR10G3Q8NGC4 313 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR2D3Q8NGH3 330 aa3.33□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR51Q1Q8NH59 317 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms