RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 TWIST1Q15672 202 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 MPV17L2Q567V2 206 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 ABHD5Q8WTS1 349 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 CLEC1BQ9P126 229 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 OR1L1Q8NH94 360 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 GGTLC1Q9BX51 225 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 SPHK2Q9NRA0 654 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 HMGA2P52926 109 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 SRSF3P84103 164 aaKnown RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 TBC1D28Q2M2D7 210 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 CDCP2Q5VXM1 449 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 IMMP2LQ96T52 175 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 ZNF443Q9Y2A4 671 aaPredicted RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 PLGLB1Q02325 96 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 C12orf73Q69YU5 71 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 CALHM3Q86XJ0 350 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 PRTFDC1Q9NRG1 225 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 TMEM64Q6YI46 380 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 STPG4Q8N801 248 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 HINT3Q9NQE9 182 aaKnown RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 SPANXB1Q9NS25 103 aaPredicted RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 K7EP34 96 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 OR9G4Q8NGQ1 327 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 FBLIM1Q8WUP2 373 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 C1QTNF4Q9BXJ3 329 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 SRP19P09132 144 aaKnown RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 C1orf127Q8N9H9 656 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 CHST13Q8NET6 341 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 BARX1Q9HBU1 254 aaPredicted RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 CTXND1A0A1B0GTU2 59 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 NKG7Q16617 165 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 RBPJLQ9UBG7 517 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 SRSF2Q01130 221 aaKnown RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 PIGCQ92535 297 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 PELI1Q96FA3 418 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 COL3A1P02461 1466 aaPredicted RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 H3BP45 60 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 KCNS1Q96KK3 526 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 LPAR4Q99677 370 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 BCL9O00512 1426 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 TARM1B6A8C7 271 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 ZNF137PP52743 207 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 PSG5Q15238 335 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 KCNK17Q96T54 332 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 WSB2Q9NYS7 404 aaPredicted RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 RAE1P78406 368 aaKnown RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 EWSR1Q01844 656 aaKnown RBP eCLIP4.2□□□□□ -1.742e-15■■□□□ 13.6
NEAT1-202ENST00000501122 CTU1Q7Z7A3 348 aaKnown RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 CLEC4CQ8WTT0 213 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 ATOH8Q96SQ7 321 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 IGHV2-5P01817 119 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 CST5P28325 142 aaPredicted RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 ETDBQ3ZM63 59 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 TMEM160Q9NX00 188 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 MUC21A0A0G2JKD1 596 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 MUC21A0A140T8X8 626 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 KLK10O43240 276 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 MUC21Q5SSG8 566 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 NAA38Q9BRA0 125 aaKnown RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 MESP1Q9BRJ9 268 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 ZNF252P-AS1Q0IIN9 211 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 ZDHHC16Q969W1 377 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 MARS2Q96GW9 593 aaKnown RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 DMRT3Q9NQL9 472 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 WBP1LQ9NX94 342 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 TMED7Q9Y3B3 224 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 SPINT2O43291 252 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 FAM157CP0CG43 387 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 NT5CQ8TCD5 201 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 CTHRC1Q96CG8 243 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 NXT2Q9NPJ8 142 aaKnown RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 C1orf226A1L170 272 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 PITX3O75364 302 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 CACNG8Q8WXS5 425 aa4.2□□□□□ -1.74
NEAT1-202ENST00000501122 NHP2Q9NX24 153 aaKnown RBP4.2□□□□□ -1.74
NEAT1-202ENST00000501122 TRAV9-1A0A075B6T8 112 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 HEPACAM2A8MVW5 462 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 CD8AP01732 235 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 MAGEA5P43359 124 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 OR8B8Q15620 311 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 LIAT1Q6ZQX7 453 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 OR5P3Q8WZ94 311 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 FOXD3Q9UJU5 478 aaPredicted RBP4.19□□□□□ -1.74
NEAT1-202ENST00000501122 TMEM272A0A1B0GTI8 110 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 TIMP2P16035 220 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 INSM2Q96T92 566 aaPredicted RBP4.19□□□□□ -1.74
NEAT1-202ENST00000501122 PHPT1Q9NRX4 125 aaPredicted RBP4.19□□□□□ -1.74
NEAT1-202ENST00000501122 TET1Q8NFU7 2136 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 TP53BP1Q12888 1972 aaPredicted RBP4.19□□□□□ -1.74
NEAT1-202ENST00000501122 OR4C3Q8NH37 302 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 MYEOVQ96EZ4 313 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 RBX1P62877 108 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 DPM2O94777 84 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 CLDN7O95471 211 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 TPRG1Q6ZUI0 275 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 C9orf172C9J069 976 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 OXLD1Q5BKU9 147 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 SYT8Q8NBV8 401 aa4.19□□□□□ -1.74
NEAT1-202ENST00000501122 C1orf162Q8NEQ5 155 aaPredicted RBP4.19□□□□□ -1.74
NEAT1-202ENST00000501122 AAMDCQ9H7C9 122 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms