RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 PRRG3Q9BZD7 231 aa7□□□□□ -1.29
CCDC171-209ENST00000498725 FAM192AQ9GZU8 254 aa7□□□□□ -1.29
CCDC171-209ENST00000498725 LINC00574Q9H8X3 128 aa7□□□□□ -1.29
CCDC171-209ENST00000498725 GFOD1Q9NXC2 390 aa7□□□□□ -1.29
CCDC171-209ENST00000498725 FRRS1LQ9P0K9 344 aa7□□□□□ -1.29
CCDC171-209ENST00000498725 STUB1Q9UNE7 303 aa7□□□□□ -1.29
CCDC171-209ENST00000498725 MRPS28Q9Y2Q9 187 aaKnown RBP7□□□□□ -1.29
CCDC171-209ENST00000498725 FBXO7Q9Y3I1 522 aa7□□□□□ -1.29
CCDC171-209ENST00000498725 IGHV7-81A0A0B4J1V7 117 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 SOX15O60248 233 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 SNX3O60493 162 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 SULT1C4O75897 302 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 FAM107AO95990 144 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 IGLV1-51P01701 117 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 HTR1AP08908 422 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 DBTP11182 482 aaKnown RBP6.99□□□□□ -1.29
CCDC171-209ENST00000498725 NANOS3P60323 173 aaKnown RBP6.99□□□□□ -1.29
CCDC171-209ENST00000498725 ACTBP60709 375 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 ZNF85Q03923 595 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 LSAMPQ13449 338 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 GALEQ14376 348 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 RSU1Q15404 277 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 LRRC36Q1X8D7 754 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 ATAD3CQ5T2N8 411 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 ZNF691Q5VV52 312 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 LINC00528Q8N1L1 170 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 LINC00311Q8N616 119 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 TNFAIP8L1Q8WVP5 186 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 LINC00476Q8WZB0 136 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 ZNF251Q9BRH9 671 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 RHOFQ9HBH0 211 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 TPSG1Q9NRR2 321 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 GNG12Q9UBI6 72 aa6.99□□□□□ -1.29
CCDC171-209ENST00000498725 WARS2Q9UGM6 360 aaKnown RBP6.99□□□□□ -1.29
CCDC171-209ENST00000498725 TMEM30CPA0ZSE6 113 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 ANKRD34BA5PLL1 514 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 FAM90A10PA6NDY2 464 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 A8MZ25 164 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 C15orf65H3BRN8 121 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 TXNL1O43396 289 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 OR7C1O76099 320 aaPredicted RBP6.98□□□□□ -1.29
CCDC171-209ENST00000498725 BRI3O95415 125 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 MT-ND2P03891 347 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 CSTBP04080 98 aaKnown RBP6.98□□□□□ -1.29
CCDC171-209ENST00000498725 HSPB1P04792 205 aaKnown RBP6.98□□□□□ -1.29
CCDC171-209ENST00000498725 FSTP19883 344 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 GZMHP20718 246 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 ZNF134P52741 427 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 TPPP2P59282 170 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 NDPQ00604 133 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 PMS2P11Q13670 270 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 HSP90B2PQ58FF3 399 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 C4orf48Q5BLP8 95 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 CT45A1Q5HYN5 189 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 C12orf73Q69YU5 71 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 LIN54Q6MZP7 749 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 SLC25A48Q6ZT89 311 aaKnown RBP6.98□□□□□ -1.29
CCDC171-209ENST00000498725 GTSCR1Q86UQ5 136 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 SPATA24Q86W54 205 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 MINDY2Q8NBR6 621 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 CT45A3Q8NHU0 189 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 FLYWCH2Q96CP2 140 aaKnown RBP6.98□□□□□ -1.29
CCDC171-209ENST00000498725 NCOR1P1Q9H4R4 102 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 PLEKHA3Q9HB20 300 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 CHCHD3Q9NX63 227 aaKnown RBP6.98□□□□□ -1.29
CCDC171-209ENST00000498725 ZNF580Q9UK33 172 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 ING4Q9UNL4 249 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 FOXA2Q9Y261 457 aaPredicted RBP6.98□□□□□ -1.29
CCDC171-209ENST00000498725 ST3GAL6Q9Y274 331 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 ERGIC3Q9Y282 383 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 TNCP24821 2201 aa6.98□□□□□ -1.29
CCDC171-209ENST00000498725 ZAR1LA6NP61 321 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 J3QLW9 94 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 AIPO00170 330 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 GABRPO00591 440 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 NBR2O15453 112 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 SULT1B1O43704 296 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 CDRT1O95170 752 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 HLA-DRB1P01911 266 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 ZNF19P17023 458 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 VHLP40337 213 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 EFNB1P98172 346 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 IL13RA2Q14627 380 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 PLGLAQ15195 96 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 C5orf64Q2M2E5 130 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 RNLSQ5VYX0 342 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 ELP2Q6IA86 826 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 FAHD1Q6P587 224 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 C5orf24Q7Z6I8 188 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 ZNF439Q8NDP4 499 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 OR52M1Q8NGK5 317 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 OR1L1Q8NH94 360 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 TSEN15Q8WW01 171 aaKnown RBP6.97□□□□□ -1.29
CCDC171-209ENST00000498725 ASB9Q96DX5 294 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 CLCC1Q96S66 551 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 FAM103A1Q9BTL3 118 aaKnown RBP6.97□□□□□ -1.29
CCDC171-209ENST00000498725 MRPL20Q9BYC9 149 aaKnown RBP6.97□□□□□ -1.29
CCDC171-209ENST00000498725 HIPK2Q9H2X6 1198 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 FBXL15Q9H469 300 aa6.97□□□□□ -1.29
CCDC171-209ENST00000498725 ZNF355PQ9NSJ1 428 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms