RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 CD200P41217 278 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 SNU13P55769 128 aaKnown RBP4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 TSPAN5P62079 268 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 SORDQ00796 357 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 NHLH2Q02577 135 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF154Q13106 437 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 SRSF7Q16629 238 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 PIGYQ3MUY2 71 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 CHRFAM7AQ494W8 412 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 SCGB2B2Q4G0G5 96 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 SPIN3Q5JUX0 258 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 VAX1Q5SQQ9 334 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 METTL11BQ5VVY1 283 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 FAAP20Q6NZ36 180 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ARRDC1Q8N5I2 433 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 GVQW1Q8N7I0 195 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 POC1AQ8NBT0 407 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 BEST4Q8NFU0 473 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 OR2Z1Q8NG97 314 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 OR4S1Q8NGB4 309 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 OR5AP2Q8NGF4 316 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 OR51S1Q8NGJ8 323 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 OR5H2Q8NGV7 314 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 OR10Z1Q8NGY1 313 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 NEK7Q8TDX7 302 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 CCDC107Q8WV48 283 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 TMEM171Q8WVE6 324 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 TMEM158Q8WZ71 300 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 GTF3AQ92664 365 aaKnown RBP4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 SNAPC3Q92966 411 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ERGIC1Q969X5 290 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 UPRTQ96BW1 309 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 WFIKKN1Q96NZ8 548 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ARPC5LQ9BPX5 153 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 SULT4A1Q9BR01 284 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 GINS4Q9BRT9 223 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ST6GALNAC5Q9BVH7 336 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 TINAGL1Q9GZM7 467 aaPredicted RBP4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 FGF23Q9GZV9 251 aaPredicted RBP4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ALX4Q9H161 411 aaPredicted RBP4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 TLNRD1Q9H1K6 362 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 MED28Q9H204 178 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF286AQ9HBT8 521 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 CHMP1AQ9HD42 196 aaPredicted RBP4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF701Q9NV72 531 aaPredicted RBP4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 SLC2A8Q9NY64 477 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 RASL12Q9NYN1 266 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 TAAR3PQ9P1P4 343 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 AK3Q9UIJ7 227 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ZDHHC8Q9ULC8 765 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 FZR1Q9UM11 496 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 ANAPC10Q9UM13 185 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 PRELID1Q9Y255 219 aa4.45□□□□□ -1.7
HMGXB4-208ENST00000498325 PKD1L1Q8TDX9 2849 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 A0A0A6YYJ9 748 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 hCG_1807616A0A1W2PRN6 198 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 C7orf66A4D0T2 115 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 SNRPGP15A8MWD9 76 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 DIRC3C9JPN6 131 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 F5H5P2 479 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 SSNA1O43805 119 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 CREBL2O60519 120 aaPredicted RBP4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 CRLF1O75462 422 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 SLC22A5O76082 557 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 PMP2P02689 132 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 RLN1P04808 185 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF735P0CB33 412 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 EGR2P11161 476 aaPredicted RBP4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF44P15621 663 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 AGAP20933 346 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 GLRA1P23415 457 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 CCKARP32238 428 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 HRH1P35367 487 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 ERVK11-1P61568 191 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 BSPH1Q075Z2 132 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF146Q15072 292 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 MICBQ29980 383 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 BEX5Q5H9J7 111 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 NCMAPQ5T1S8 102 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 OR52W1Q6IF63 320 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 C11orf88Q6PI97 169 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 GLDNQ6ZMI3 551 aaPredicted RBP4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 Q6ZR03 302 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 WDR86Q86TI4 376 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 LRP11Q86VZ4 500 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 ZGRF1Q86YA3 2104 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 FAM90A1Q86YD7 464 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 BATF2Q8N1L9 274 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 ZDHHC22Q8N966 263 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 SUMF2Q8NBJ7 301 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 TERB2Q8NHR7 220 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 LRRC20Q8TCA0 184 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 GIMAP1Q8WWP7 306 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 MRPL24Q96A35 216 aaKnown RBP4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 ELMOD3Q96FG2 381 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF488Q96MN9 340 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 FYTTD1Q96QD9 318 aaKnown RBP4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 SLC6A7Q99884 636 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 NRIP2Q9BQI9 281 aa4.44□□□□□ -1.7
HMGXB4-208ENST00000498325 AIFM2Q9BRQ8 373 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms