RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 TMEM170AQ8WVE7 144 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 ZCCHC14Q8WYQ9 949 aaKnown RBP9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 RDH5Q92781 318 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 STARD4Q96DR4 205 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 ACY3Q96HD9 319 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 BMFQ96LC9 184 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 CDH20Q9HBT6 801 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 FREM2Q5SZK8 3169 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 TCRBV21S2A2A0A5A6 115 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 CEACAM18A8MTB9 384 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 WDR1O75083 606 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 CRISP2P16562 243 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 KITLGP21583 273 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 IL3RAP26951 378 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 MPLP40238 635 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 THEM4Q5T1C6 240 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 C9orf135Q5VTT2 229 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 MRGPRGQ86SM5 289 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 RHBDD1Q8TEB9 315 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 CDS2O95674 445 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 EFEMP2O95967 443 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 SCTP09683 121 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 C9orf40Q8IXQ3 194 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 ZDHHC23Q8IYP9 409 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 CISD1Q9NZ45 108 aaKnown RBP9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 OR6C3Q9NZP0 311 aa9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 MRPS18CQ9Y3D5 142 aaKnown RBP9.17□□□□□ -0.94
TRAPPC12-223ENST00000497597 OR6C6A6NF89 314 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 ALG1L2C9J202 215 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 NPIPA2E9PIF3 369 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 HS3ST1O14792 307 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 SEMA4FO95754 770 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 PFN1P07737 140 aaKnown RBP9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 ZNF17P17021 662 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 GALNSP34059 522 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 BLKP51451 505 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 RND2P52198 227 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 TCL1AP56279 114 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 IL24Q13007 206 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 SHHQ15465 462 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 PRR31Q5SQ13 230 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 FNDC7Q5VTL7 733 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 NOXO1Q8NFA2 376 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 OR5AU1Q8NGC0 362 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 C18orf12Q96KH6 178 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 MIEN1Q9BRT3 115 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 COL4A6Q14031 1691 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 DIRC3C9JPN6 131 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 M0QZ24 198 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 DHRS3O75911 302 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 IGHV3-9P01782 118 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 CA3P07451 260 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 SPATA45Q537H7 98 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 ZNF818PQ6ZRF7 136 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 WDR5BQ86VZ2 330 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 OR4D5Q8NGN0 318 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 RNASEH2CQ8TDP1 164 aaKnown RBP9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 OR4C12Q96R67 309 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 TMEM222Q9H0R3 208 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 MTCH2Q9Y6C9 303 aa9.16□□□□□ -0.94
TRAPPC12-223ENST00000497597 DUXBA0A1W2PPF3 345 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 FRG2CA6NGY1 282 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 SERF1AO75920 110 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 LINC00614P0C842 121 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 C1QTNF9P0C862 333 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 IER3P46695 156 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 EIF3IQ13347 325 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 SAPCD1Q5SSQ6 148 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 SELENOHQ8IZQ5 122 aaKnown RBP9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 OSR2Q8N2R0 312 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 ZNF596Q8TC21 504 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 SLC35E1Q96K37 410 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 PARD6GQ9BYG4 376 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 B3GAT1Q9P2W7 334 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 ABCA1O95477 2261 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 ICE1Q9Y2F5 2266 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 H0Y8G0 127 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 FCN1O00602 326 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 TUSC2O75896 110 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 NDUFB4O95168 129 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 VDAC1P21796 283 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 HBG1P69891 147 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 HBG2P69892 147 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 HTD2P86397 168 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 MSMO1Q15800 293 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 SNAI3Q3KNW1 292 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 TMEM196Q5HYL7 178 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 FFAR4Q5NUL3 377 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 OR56B2PQ8NGI1 322 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 PSMF1Q92530 271 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 ST6GALNAC6Q969X2 333 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 MOB1AQ9H8S9 216 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 TMEM106BQ9NUM4 274 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 ZNF586Q9NXT0 402 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 R4GN57 208 aa9.15□□□□□ -0.94
TRAPPC12-223ENST00000497597 CLEC18AA5D8T8 446 aa9.15□□□□□ -0.95
TRAPPC12-223ENST00000497597 ZNF732B4DXR9 585 aa9.15□□□□□ -0.95
TRAPPC12-223ENST00000497597 RRP8O43159 456 aaKnown RBP9.15□□□□□ -0.95
TRAPPC12-223ENST00000497597 LILRA1O75019 489 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms