RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 Q6ZWC4 215 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 MOB3AQ96BX8 217 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 FOXI3A8MTJ6 420 aaPredicted RBP11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 TNFSF13O75888 250 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 NTSR1P30989 418 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 HINT1P49773 126 aaPredicted RBP11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 UBE2G2P60604 165 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 SPANXN5Q5MJ07 72 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 MCEMP1Q8IX19 187 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 OR10G4Q8NGN3 311 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 FRYLO94915 3013 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 AHCTF1Q8WYP5 2266 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 NCOA6Q14686 2063 aaPredicted RBP11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 C1QTNF9BB2RNN3 333 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 PDLIM4P50479 330 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 PPP1CBP62140 327 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 FBXW9Q5XUX1 488 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 Q6ZN92 141 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 C9orf40Q8IXQ3 194 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 STPG4Q8N801 248 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 OR5L2Q8NGL0 311 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 TMEM234Q8WY98 164 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 BMFQ96LC9 184 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 TECTBQ96PL2 329 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 ST3GAL6Q9Y274 331 aa11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 RP1L1Q8IWN7 2480 aaPredicted RBP11.26□□□□□ -0.61
GAPVD1-220ENST00000497580 IGHMP01871 453 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 SPINK2P20155 84 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 BAXQ07812 192 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 C9orf50Q5SZB4 431 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 UNQ5815/PRO19632Q6UWF5 114 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 GPR35Q9HC97 309 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 COPS7AQ9UBW8 275 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 TPPP2P59282 170 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 ZNF818PQ6ZRF7 136 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 CISD2Q8N5K1 135 aaKnown RBP11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 BORCS8Q96FH0 119 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 TM2D1Q9BX74 207 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 CCL28Q9NRJ3 127 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 PLEK2Q9NYT0 353 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 CACNA1DQ01668 2161 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 TRBV11-1A0A0K0K1C0 115 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 LNP1A1A4G5 178 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 VSTM2BA6NLU5 285 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 MYF5P13349 255 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 PYGO2Q9BRQ0 406 aa11.25□□□□□ -0.61
GAPVD1-220ENST00000497580 PAGE4O60829 102 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 DHRS3O75911 302 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 IGHEP01854 428 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 ADMP35318 185 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 HNRNPA3P51991 378 aaKnown RBP11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 SRPXP78539 464 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 ATOH7Q8N100 152 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 OR10V1Q8NGI7 309 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 RASL10BQ96S79 203 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 ZNF552Q9H707 407 aaPredicted RBP11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 IL23AQ9NPF7 189 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 TRANK1O15050 2925 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 ABCA7Q8IZY2 2146 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 LINC01565O15544 149 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 IFI6P09912 130 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 CBLN1P23435 193 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 GFERP55789 205 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 IGLV3-21P80748 117 aaPredicted RBP11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 MALLQ13021 153 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 CRIP3Q6Q6R5 217 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 CADM4Q8NFZ8 388 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 ADIPOR1Q96A54 375 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 A0A0G2JRQ6 117 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 SERF1AO75920 110 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 ARL16Q0P5N6 197 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 TMPRSS7Q7RTY8 843 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 SGMS2Q8NHU3 365 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 P2RX4Q99571 388 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 DECR2Q9NUI1 292 aa11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 ERRFI1Q9UJM3 462 aaPredicted RBP11.24□□□□□ -0.61
GAPVD1-220ENST00000497580 DUXBA0A1W2PPF3 345 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 A6NCN8 305 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 SERPINE2P07093 398 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 LINC00271P0C7V0 271 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 VDAC1P21796 283 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 DTYMKP23919 212 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 OR4C5Q8NGB2 326 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 DDIT4LQ96D03 193 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 SIGLEC12Q96PQ1 595 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 TMEM204Q9BSN7 226 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 ALKBH7Q9BT30 221 aaPredicted RBP11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 PSENENQ9NZ42 101 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 M0QZ24 198 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 SPINK4O60575 86 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 SERPINA7P05543 415 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 HNRNPA2B1P22626 353 aaKnown RBP11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 PAX9P55771 341 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 ZNF468Q5VIY5 522 aaPredicted RBP11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 RABEPKQ7Z6M1 372 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 APH1AQ96BI3 265 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 C11orf1Q9H5F2 150 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 PMCHP20382 165 aa11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 SUMO1P63165 101 aaKnown RBP11.23□□□□□ -0.61
GAPVD1-220ENST00000497580 EIF3IQ13347 325 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms