RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 REEP6Q96HR9 211 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 AKR1E2Q96JD6 320 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 PKIBQ9C010 78 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 PBOV1Q9GZY1 135 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 BEX1Q9HBH7 125 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 SMCO4Q9NRQ5 59 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 PLEKHJ1Q9NW61 149 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 FAM206AQ9NX38 181 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 ERRFI1Q9UJM3 462 aaPredicted RBP5.3□□□□□ -1.56
SSBP1-213ENST00000496622 PITPNC1Q9UKF7 332 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 BOKQ9UMX3 212 aaPredicted RBP5.3□□□□□ -1.56
SSBP1-213ENST00000496622 DHDHQ9UQ10 334 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 R4GMQ9 66 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 ICE1Q9Y2F5 2266 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 CFAP46Q8IYW2 2715 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 A0A1B0GW55 424 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 A0A1W2PP11 408 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 A0A1W2PR80 420 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 ANKRD20A5PA0PJZ0 165 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF503-AS2A6NEH8 195 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 OR8U9P0C7N5 309 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 DUX4L2P0CJ85 424 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 DUX4L3P0CJ86 424 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 DUX4L4P0CJ87 422 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 DUX4L5P0CJ88 424 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 DUX4L6P0CJ89 424 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 DUX4L7P0CJ90 424 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 PPIAL4GP0DN37 164 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 RAG2P55895 527 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 ERVFC1-1P60608 527 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 BATFQ16520 125 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 SNAI3Q3KNW1 292 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF766Q5HY98 468 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 TMEM255AQ5JRV8 349 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 TPTE2P1Q5T6R2 138 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 MDS2Q8NDY4 140 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 OR4S1Q8NGB4 309 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 OR8B12Q8NGG6 310 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 ORAOV1Q8WV07 137 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 SMIM8Q96KF7 97 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 CLCC1Q96S66 551 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 GPR84Q9NQS5 396 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 SLC7A10Q9NS82 523 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 DUX4Q9UBX2 424 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 C14orf166Q9Y224 244 aaKnown RBP5.3□□□□□ -1.56
SSBP1-213ENST00000496622 MMP24Q9Y5R2 645 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 IGSF10Q6WRI0 2623 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 CADP27708 2225 aa5.3□□□□□ -1.56
SSBP1-213ENST00000496622 H7C417 338 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 KLK10O43240 276 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 SYT7O43581 403 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 ACTL6AO96019 429 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 HLA-DQB1P01920 261 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 LIPCP11150 499 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 CDK2P24941 298 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 GUCA1AP43080 201 aaPredicted RBP5.29□□□□□ -1.56
SSBP1-213ENST00000496622 KIAA0141Q14154 515 aaPredicted RBP5.29□□□□□ -1.56
SSBP1-213ENST00000496622 RBM39Q14498 530 aaKnown RBP5.29□□□□□ -1.56
SSBP1-213ENST00000496622 SRSF7Q16629 238 aaKnown RBP eCLIP5.29□□□□□ -1.56
SSBP1-213ENST00000496622 COL5A1-AS1Q5SY13 56 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 BCL2L15Q5TBC7 163 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 DHRS11Q6UWP2 260 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 DND1Q8IYX4 353 aaKnown RBP5.29□□□□□ -1.56
SSBP1-213ENST00000496622 BATF2Q8N1L9 274 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 SMIM20Q8N5G0 67 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 CMBLQ96DG6 245 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 ZC3HAV1LQ96H79 300 aaKnown RBP5.29□□□□□ -1.56
SSBP1-213ENST00000496622 MARVELD1Q9BSK0 173 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 PRRG4Q9BZD6 226 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 TLNRD1Q9H1K6 362 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 SPRR3Q9UBC9 169 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 KLK13Q9UKR3 277 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 TNFSF18Q9UNG2 199 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 CARHSP1Q9Y2V2 147 aaKnown RBP5.29□□□□□ -1.56
SSBP1-213ENST00000496622 MYO7BQ6PIF6 2116 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 ARID1AO14497 2285 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 TRBV5-7A0A0A0MS05 114 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 NPIPB13A6NJU9 1138 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 OR5H1A6NKK0 313 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 NPIPB4C9JG80 1138 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 ZNF878C9JN71 531 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 INMT-MINDY4F8WBC2 141 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 CDIPTO14735 213 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 SCGNO76038 276 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 TOXO94900 526 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 TSPAN13O95857 204 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 SCGB1D1O95968 90 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 HLA-HP01893 362 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 AMBPP02760 352 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 RAB5AP20339 215 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 MSR1P21757 451 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 OMGP23515 440 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 S100GP29377 79 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 RBMXP38159 391 aaKnown RBP5.29□□□□□ -1.56
SSBP1-213ENST00000496622 CX3CR1P49238 355 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 AKR1C2P52895 323 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 RANP62826 216 aaKnown RBP5.29□□□□□ -1.56
SSBP1-213ENST00000496622 AKR1C1Q04828 323 aa5.29□□□□□ -1.56
SSBP1-213ENST00000496622 MEF2DQ14814 521 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms