RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 TMEM104Q8NE00 496 aa19.29■□□□□ 0.68
HLA-C-209ENST00000495835 OR56B4Q8NH76 319 aa19.29■□□□□ 0.68
HLA-C-209ENST00000495835 CCDC107Q8WV48 283 aa19.29■□□□□ 0.68
HLA-C-209ENST00000495835 TRAPPC2LQ9UL33 140 aa19.29■□□□□ 0.68
HLA-C-209ENST00000495835 HSD17B6O14756 317 aa19.28■□□□□ 0.68
HLA-C-209ENST00000495835 CD37P11049 281 aa19.28■□□□□ 0.68
HLA-C-209ENST00000495835 IL3RAP26951 378 aa19.28■□□□□ 0.68
HLA-C-209ENST00000495835 AQP4P55087 323 aa19.28■□□□□ 0.68
HLA-C-209ENST00000495835 IRF3Q14653 427 aa19.28■□□□□ 0.68
HLA-C-209ENST00000495835 C1orf100Q5SVJ3 147 aa19.28■□□□□ 0.68
HLA-C-209ENST00000495835 STEAP3Q658P3 488 aa19.28■□□□□ 0.68
HLA-C-209ENST00000495835 R3HDM4Q96D70 268 aa19.28■□□□□ 0.68
HLA-C-209ENST00000495835 VCX3BQ9H321 246 aa19.28■□□□□ 0.68
HLA-C-209ENST00000495835 BANF2Q9H503 90 aa19.28■□□□□ 0.68
HLA-C-209ENST00000495835 DUSP21Q9H596 190 aa19.28■□□□□ 0.68
HLA-C-209ENST00000495835 TGP01266 2768 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 C12orf77C9JDV5 145 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 TMEM11P17152 192 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 SRMP19623 302 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 MYF6P23409 242 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 DIAPH2-AS1Q14236 149 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 MED22Q15528 200 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 FBLN7Q53RD9 439 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 KPRPQ5T749 579 aaPredicted RBP19.27■□□□□ 0.68
HLA-C-209ENST00000495835 SAMD5Q5TGI4 173 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 HIST2H2BDQ6DRA6 164 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 NRG4Q8WWG1 115 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 ISYNA1Q9NPH2 558 aa19.27■□□□□ 0.68
HLA-C-209ENST00000495835 IGHV1-3A0A0C4DH29 117 aa19.26■□□□□ 0.67
HLA-C-209ENST00000495835 TXNL1O43396 289 aa19.26■□□□□ 0.67
HLA-C-209ENST00000495835 PDCD6O75340 191 aa19.26■□□□□ 0.67
HLA-C-209ENST00000495835 GP2P55259 537 aaKnown RBP19.26■□□□□ 0.67
HLA-C-209ENST00000495835 HES1Q14469 280 aa19.26■□□□□ 0.67
HLA-C-209ENST00000495835 LRRTM1Q86UE6 522 aa19.26■□□□□ 0.67
HLA-C-209ENST00000495835 LYG1Q8N1E2 194 aa19.26■□□□□ 0.67
HLA-C-209ENST00000495835 OR4X2Q8NGF9 303 aa19.26■□□□□ 0.67
HLA-C-209ENST00000495835 ST6GALNAC6Q969X2 333 aa19.26■□□□□ 0.67
HLA-C-209ENST00000495835 TMED9Q9BVK6 235 aa19.26■□□□□ 0.67
HLA-C-209ENST00000495835 ANKRD60Q9BZ19 345 aa19.26■□□□□ 0.67
HLA-C-209ENST00000495835 MBNL3Q9NUK0 354 aaKnown RBP19.26■□□□□ 0.67
HLA-C-209ENST00000495835 TSSC4Q9Y5U2 329 aaPredicted RBP19.26■□□□□ 0.67
HLA-C-209ENST00000495835 ZNF137PP52743 207 aa19.25■□□□□ 0.67
HLA-C-209ENST00000495835 TRAM1Q15629 374 aa19.25■□□□□ 0.67
HLA-C-209ENST00000495835 BEAN1Q3B7T3 259 aa19.25■□□□□ 0.67
HLA-C-209ENST00000495835 HSD17B12Q53GQ0 312 aa19.25■□□□□ 0.67
HLA-C-209ENST00000495835 SIGIRRQ6IA17 410 aa19.25■□□□□ 0.67
HLA-C-209ENST00000495835 SLC25A48Q6ZT89 311 aaKnown RBP19.25■□□□□ 0.67
HLA-C-209ENST00000495835 IZUMO1Q8IYV9 350 aa19.25■□□□□ 0.67
HLA-C-209ENST00000495835 C5orf56Q8N8D9 126 aa19.25■□□□□ 0.67
HLA-C-209ENST00000495835 OR4K15Q8NH41 348 aa19.25■□□□□ 0.67
HLA-C-209ENST00000495835 UFD1Q92890 307 aa19.25■□□□□ 0.67
HLA-C-209ENST00000495835 LRRC42Q9Y546 428 aa19.25■□□□□ 0.67
HLA-C-209ENST00000495835 PRKDCP78527 4128 aaKnown RBP19.24■□□□□ 0.67
HLA-C-209ENST00000495835 A0A1W2PPE3 182 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 IGKV1D-33P01593 117 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 IGKV1-33P01594 117 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 UCHL1P09936 223 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 CD1BP29016 333 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 TPBGQ13641 420 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 INSL4Q14641 139 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 C9orf152Q5JTZ5 239 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 RBM48Q5RL73 367 aaKnown RBP19.24■□□□□ 0.67
HLA-C-209ENST00000495835 CEACAM19Q7Z692 300 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 MOB3BQ86TA1 216 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 ZNF439Q8NDP4 499 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 KCNG3Q8TAE7 436 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 RTN4IP1Q8WWV3 396 aaPredicted RBP19.24■□□□□ 0.67
HLA-C-209ENST00000495835 KCNIP1Q9NZI2 227 aa19.24■□□□□ 0.67
HLA-C-209ENST00000495835 TCRBV4S1A1TA0A5B7 111 aa19.23■□□□□ 0.67
HLA-C-209ENST00000495835 G3V4G9 280 aa19.23■□□□□ 0.67
HLA-C-209ENST00000495835 RGS10O43665 173 aa19.23■□□□□ 0.67
HLA-C-209ENST00000495835 HBZP02008 142 aa19.23■□□□□ 0.67
HLA-C-209ENST00000495835 PSMA1P25786 263 aaKnown RBP19.23■□□□□ 0.67
HLA-C-209ENST00000495835 HSPA13P48723 471 aa19.23■□□□□ 0.67
HLA-C-209ENST00000495835 C1QL4Q86Z23 238 aa19.23■□□□□ 0.67
HLA-C-209ENST00000495835 WFDC9Q8NEX5 89 aa19.23■□□□□ 0.67
HLA-C-209ENST00000495835 OR2T10Q8NGZ9 312 aa19.23■□□□□ 0.67
HLA-C-209ENST00000495835 CHPT1Q8WUD6 406 aa19.23■□□□□ 0.67
HLA-C-209ENST00000495835 GNG12Q9UBI6 72 aa19.23■□□□□ 0.67
HLA-C-209ENST00000495835 IGHV3-43A0A0B4J1X8 118 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 BPNT1O95861 308 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 MPIG6BO95866 241 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 IGHV3-43DP0DP04 118 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 VSIG8P0DPA2 414 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 RCC1P18754 421 aaPredicted RBP19.22■□□□□ 0.67
HLA-C-209ENST00000495835 HTR2CP28335 458 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 RANBP1P43487 201 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 RPS27AP62979 156 aaKnown RBP19.22■□□□□ 0.67
HLA-C-209ENST00000495835 TCTEX1D4Q5JR98 221 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 LY6G6FQ5SQ64 297 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 FAM27D1Q5T7N8 215 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 EAF1Q96JC9 268 aaPredicted RBP19.22■□□□□ 0.67
HLA-C-209ENST00000495835 NEDD4LQ96PU5 975 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 TMEM59Q9BXS4 323 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 TAF9BQ9HBM6 251 aa19.22■□□□□ 0.67
HLA-C-209ENST00000495835 UBE2QL1A1L167 161 aa19.21■□□□□ 0.67
HLA-C-209ENST00000495835 SLC22A1O15245 554 aa19.21■□□□□ 0.67
HLA-C-209ENST00000495835 IGHG2P01859 326 aa19.21■□□□□ 0.67
HLA-C-209ENST00000495835 CHATP28329 748 aa19.21■□□□□ 0.67
HLA-C-209ENST00000495835 HTD2P86397 168 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms