RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 OR10H4Q8NGA5 316 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 OR51A4Q8NGJ6 313 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 OR5D14Q8NGL3 314 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 IL4I1Q96RQ9 567 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 GNG8Q9UK08 70 aa10.3□□□□□ -0.76
COL1A1-209ENST00000495677 ALMS1Q8TCU4 4167 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 M0R129 80 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 SULT1B1O43704 296 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 SOX15O60248 233 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 RPSAP08865 295 aaKnown RBP10.29□□□□□ -0.76
COL1A1-209ENST00000495677 CNTFRP26992 372 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 EPHA2P29317 976 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 NANOS3P60323 173 aaKnown RBP10.29□□□□□ -0.76
COL1A1-209ENST00000495677 TMEM30BQ3MIR4 351 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 TP53I3Q53FA7 332 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 CT45A1Q5HYN5 189 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 NHLRC3Q5JS37 347 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 PYHIN1Q6K0P9 492 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 LIN54Q6MZP7 749 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 PARP16Q8N5Y8 322 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 SUMF2Q8NBJ7 301 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 NPBQ8NG41 125 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 OR13C3Q8NGS6 347 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 OR10AC1Q8NH08 325 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 CT45A3Q8NHU0 189 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 DPCDQ9BVM2 203 aaPredicted RBP10.29□□□□□ -0.76
COL1A1-209ENST00000495677 ANKRD60Q9BZ19 345 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 CST11Q9H112 138 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 NUBP2Q9Y5Y2 271 aa10.29□□□□□ -0.76
COL1A1-209ENST00000495677 A0A1W2PN81 502 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 TMEM30CPA0ZSE6 113 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 RBMY1BA6NDE4 496 aaKnown RBP10.28□□□□□ -0.76
COL1A1-209ENST00000495677 RBMY1EA6NEQ0 496 aaKnown RBP10.28□□□□□ -0.76
COL1A1-209ENST00000495677 C12orf77C9JDV5 145 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 H0Y980 276 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 SLC31A2O15432 143 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 DCTN3O75935 186 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 NDUFA3O95167 84 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 RBMY1DP0C7P1 496 aaKnown RBP10.28□□□□□ -0.76
COL1A1-209ENST00000495677 ARSBP15848 533 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 BLVRBP30043 206 aaPredicted RBP10.28□□□□□ -0.76
COL1A1-209ENST00000495677 CHRNA7P36544 502 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 ACTBP60709 375 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 C5orf64Q2M2E5 130 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 ZNF660Q6AZW8 331 aaPredicted RBP10.28□□□□□ -0.76
COL1A1-209ENST00000495677 CD200R1LQ6Q8B3 271 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 ANKRD13BQ86YJ7 626 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 LINC00476Q8WZB0 136 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 CPNE2Q96FN4 548 aaPredicted RBP10.28□□□□□ -0.76
COL1A1-209ENST00000495677 RHOVQ96L33 236 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 THAP7Q9BT49 309 aaPredicted RBP10.28□□□□□ -0.76
COL1A1-209ENST00000495677 HIPK2Q9H2X6 1198 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 RAB9BQ9NP90 201 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 PARP11Q9NR21 331 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 FOXA2Q9Y261 457 aaPredicted RBP10.28□□□□□ -0.76
COL1A1-209ENST00000495677 ARL2BPQ9Y2Y0 163 aa10.28□□□□□ -0.76
COL1A1-209ENST00000495677 OR4C45A6NMZ5 311 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 NBR2O15453 112 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 MT-ND4P03905 459 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 HTR1AP08908 422 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 ATP6V1E1P36543 226 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 TMEM267Q0VDI3 215 aaPredicted RBP10.27□□□□□ -0.77
COL1A1-209ENST00000495677 PIGYQ3MUY2 71 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 ZNF529Q6P280 563 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 LINC00596Q86U02 117 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 RBMXL1Q96E39 390 aaKnown RBP10.27□□□□□ -0.77
COL1A1-209ENST00000495677 NSL1Q96IY1 281 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 ZNF251Q9BRH9 671 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 TUBA4BQ9H853 241 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 ST3GAL6Q9Y274 331 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 HERC2O95714 4834 aa10.27□□□□□ -0.77
COL1A1-209ENST00000495677 IGHV3-43A0A0B4J1X8 118 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 J3QRE1 110 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 SLC25A17O43808 307 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 FKBP6O75344 327 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 IGHV3-43DP0DP04 118 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 ALKBH1Q13686 389 aaKnown RBP10.26□□□□□ -0.77
COL1A1-209ENST00000495677 ZSCAN26Q16670 478 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 AKIRIN2Q53H80 203 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 KDM4DQ6B0I6 523 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 ZNF497Q6ZNH5 498 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 SATL1Q86VE3 508 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 RFKQ969G6 155 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 RITA1Q96K30 269 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 SLA2Q9H6Q3 261 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 SIGLEC8Q9NYZ4 499 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 IL36GQ9NZH8 169 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 ENOPH1Q9UHY7 261 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 FBXO7Q9Y3I1 522 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 GMPPBQ9Y5P6 360 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 KMT2AQ03164 3969 aa10.26□□□□□ -0.77
COL1A1-209ENST00000495677 GABRPO00591 440 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 SLC16A6O15403 523 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 RGS11O94810 467 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 CSTBP04080 98 aaKnown RBP10.25□□□□□ -0.77
COL1A1-209ENST00000495677 EGR2P11161 476 aaPredicted RBP10.25□□□□□ -0.77
COL1A1-209ENST00000495677 ZP3P21754 424 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 RSU1Q15404 277 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 MPV17LQ2QL34 196 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 GTSCR1Q86UQ5 136 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms