RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 SCGNO76038 276 aa14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 UBE2E1P51965 193 aa14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 MRPS15P82914 257 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 DYNC1I2Q13409 638 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 C6orf183Q5T699 404 aa14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 C17orf50Q8WW18 174 aa14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 SLC6A7Q99884 636 aa14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 SLIRPQ9GZT3 109 aaKnown RBP14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 KCNIP1Q9NZI2 227 aa14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 ZNRD1Q9P1U0 126 aa14.57□□□□□ -0.08
PDLIM7-208ENST00000493815 IGHV2-26A0A0B4J1V2 119 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 ZNF701M0R085 212 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 NPFFO15130 113 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 XRCC3O43542 346 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 APOA1P02647 267 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 PAX6P26367 422 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 GUCA2AQ02747 115 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 HACD4Q5VWC8 232 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 ZNF880Q6PDB4 577 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 ABHD12Q8N2K0 398 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 OR13D1Q8NGV5 346 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 GCDHQ92947 438 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 RIMS4Q9H426 269 aaPredicted RBP14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 OCEL1Q9H607 264 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 ZNF286AQ9HBT8 521 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 Q9N2K0 584 aa14.56□□□□□ -0.08
PDLIM7-208ENST00000493815 A0A0U1RQK1 487 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 MEIOCA2RUB1 952 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 FAM25AB3EWG3 89 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 FAM25CB3EWG5 89 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 FAM25GB3EWG6 89 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 SDCBPO00560 298 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 SPINT2O43291 252 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 ARG1P05089 322 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 FCGR3AP08637 254 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 GSTP1P09211 210 aaKnown RBP14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 FPR2P25090 351 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 SAA4P35542 130 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 TMEM69Q5SWH9 247 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 LAX1Q8IWV1 398 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 DGCR14Q96DF8 476 aaKnown RBP14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 C6orf62Q9GZU0 229 aaPredicted RBP14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 MIXL1Q9H2W2 232 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 MRPS7Q9Y2R9 242 aaKnown RBP14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 TRBV6-6A0A0A6YYG2 114 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 A0A0A6YYH2 397 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 A0A1W2PPE3 182 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 A6NJ64 397 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 SSX5O60225 188 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 TALDO1P37837 337 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 LOXL3P58215 753 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 TAS2R20P59543 309 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 GNG2P59768 71 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 LHFPL4Q7Z7J7 247 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 OR10V1Q8NGI7 309 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 IL1F10Q8WWZ1 152 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 CLEC7AQ9BXN2 247 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 AUNIPQ9H7T9 357 aa14.55□□□□□ -0.08
PDLIM7-208ENST00000493815 FCER2P06734 321 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 SCTP09683 121 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 GNG10P50151 68 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 GNMTQ14749 295 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 ARL6IP1Q15041 203 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 HMGN3Q15651 99 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 DEFB112Q30KQ8 113 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 LDLRAD2Q5SZI1 272 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 OR52W1Q6IF63 320 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 TRAT1Q6PIZ9 186 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 OR11H6Q8NGC7 330 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 OR52L2PQ8NGH6 319 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 ZNF48Q96MX3 618 aaPredicted RBP14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 ST6GALNAC5Q9BVH7 336 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 NDUFA13Q9P0J0 144 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 JMJD1CQ15652 2540 aa14.54□□□□□ -0.08
PDLIM7-208ENST00000493815 IGKV1D-8A0A087WSZ0 117 aa14.53□□□□□ -0.08
PDLIM7-208ENST00000493815 F2RL2O00254 374 aa14.53□□□□□ -0.08
PDLIM7-208ENST00000493815 MNDAP41218 407 aa14.53□□□□□ -0.08
PDLIM7-208ENST00000493815 MOB1BQ7L9L4 216 aa14.53□□□□□ -0.08
PDLIM7-208ENST00000493815 MCFD2Q8NI22 146 aa14.53□□□□□ -0.08
PDLIM7-208ENST00000493815 AJUBAQ96IF1 538 aa14.53□□□□□ -0.08
PDLIM7-208ENST00000493815 CMTM3Q96MX0 182 aa14.53□□□□□ -0.08
PDLIM7-208ENST00000493815 OR2S2Q9NQN1 319 aa14.53□□□□□ -0.08
PDLIM7-208ENST00000493815 GNG12Q9UBI6 72 aa14.53□□□□□ -0.08
PDLIM7-208ENST00000493815 PSG11Q9UQ72 335 aa14.53□□□□□ -0.08
PDLIM7-208ENST00000493815 MEIS3P1A6NDR6 274 aa14.52□□□□□ -0.08
PDLIM7-208ENST00000493815 ODF3BA8MYP8 253 aa14.52□□□□□ -0.08
PDLIM7-208ENST00000493815 HLA-DRB3P79483 266 aa14.52□□□□□ -0.08
PDLIM7-208ENST00000493815 PNLIPRP3Q17RR3 467 aa14.52□□□□□ -0.08
PDLIM7-208ENST00000493815 ZNF626Q68DY1 528 aa14.52□□□□□ -0.08
PDLIM7-208ENST00000493815 C9orf139Q6ZV77 190 aa14.52□□□□□ -0.08
PDLIM7-208ENST00000493815 SNX29P2Q8IUI4 249 aa14.52□□□□□ -0.08
PDLIM7-208ENST00000493815 SIGLECL1Q8N7X8 197 aa14.52□□□□□ -0.08
PDLIM7-208ENST00000493815 GALMQ96C23 342 aa14.52□□□□□ -0.08
PDLIM7-208ENST00000493815 GFOD1Q9NXC2 390 aa14.52□□□□□ -0.08
PDLIM7-208ENST00000493815 EXTL2Q9UBQ6 330 aa14.52□□□□□ -0.08
PDLIM7-208ENST00000493815 A0A087X0M5 115 aa14.52□□□□□ -0.09
PDLIM7-208ENST00000493815 A0A1B0GX30 115 aa14.52□□□□□ -0.09
PDLIM7-208ENST00000493815 TRDCB7Z8K6 153 aa14.52□□□□□ -0.09
PDLIM7-208ENST00000493815 HLA-DQB1P01920 261 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms