RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 LINC00615Q96LM1 132 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-221ENST00000493795 MS4A7Q9GZW8 240 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-221ENST00000493795 A1L4Q6 167 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF98A6NK75 572 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 PLPP3O14495 311 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 FFAR1O14842 300 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 SRD5A2P31213 254 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 MPLP40238 635 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 NUBP1P53384 320 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 MVDP53602 400 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF56Q15929 161 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 RTN4RL1Q86UN2 441 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-221ENST00000493795 OR5A1Q8NGJ0 315 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 TXNDC17Q9BRA2 123 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 MRPL18Q9H0U6 180 aaKnown RBP6.9□□□□□ -1.3
BRCA1-221ENST00000493795 PARLQ9H300 379 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 KCNE5Q9UJ90 142 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 A0A1W2PQM1 296 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 SSPNQ14714 243 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 LRP10Q7Z4F1 713 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 OR4D5Q8NGN0 318 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 PRSS27Q9BQR3 290 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 NPFFR1Q9GZQ6 430 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 RNF122Q9H9V4 155 aa6.9□□□□□ -1.3
BRCA1-221ENST00000493795 MYH7BA7E2Y1 1941 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 A0A1B0GWB2 263 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 NKX2-2O95096 273 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 IGF2P01344 180 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 PSG2P11465 335 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 PSG6Q00889 435 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 ASB10Q8WXI3 467 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 WFIKKN1Q96NZ8 548 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 GNRHR2Q96P88 292 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 RTN4RQ9BZR6 473 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 PXMP4Q9Y6I8 212 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 LMO7Q8WWI1 1683 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 CEACAM18A8MTB9 384 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 CA11O75493 328 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 EPHA8P29322 1005 aaPredicted RBP6.9□□□□□ -1.31
BRCA1-221ENST00000493795 DDTP30046 118 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 OTX1P32242 354 aaPredicted RBP6.9□□□□□ -1.31
BRCA1-221ENST00000493795 GALNSP34059 522 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 SMAD4Q13485 552 aaKnown RBP6.9□□□□□ -1.31
BRCA1-221ENST00000493795 IL11RAQ14626 422 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 FAM209BQ5JX69 171 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 ACER2Q5QJU3 275 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 OR1K1Q8NGR3 316 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 EAF1Q96JC9 268 aaPredicted RBP6.9□□□□□ -1.31
BRCA1-221ENST00000493795 ST6GAL2Q96JF0 529 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 NRIP2Q9BQI9 281 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 NPVFQ9HCQ7 196 aa6.9□□□□□ -1.31
BRCA1-221ENST00000493795 ETHE1O95571 254 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 HPRT1P00492 218 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 GLULP15104 373 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 ATP6V0CP27449 155 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 SERF2P84101 59 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 TEX30Q5JUR7 227 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 ANKRD33Q7Z3H0 272 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 OR6X1Q8NH79 312 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 FAM216AQ8WUB2 273 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 DIRC2Q96SL1 478 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 DDA1Q9BW61 102 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 TREM2Q9NZC2 230 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 LINC00862A6NCI5 91 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 OR11H12B2RN74 326 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 OR11H1Q8NG94 326 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 OR11H2Q8NH07 326 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 PHLDA1Q8WV24 401 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-221ENST00000493795 OR5AC2Q9NZP5 309 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 TNFSF18Q9UNG2 199 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 RPL36A-HNRNPH2H7BZ11 118 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 J3QT63 122 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 SRFP11831 508 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 NXPH1P58417 271 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 ZNF345Q14585 488 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 RHOVQ96L33 236 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 DUX5Q96PT3 197 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 CACNA1FO60840 1977 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 H3BRM9 83 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 INSL4Q14641 139 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 ZNF714Q96N38 554 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 IL36RNQ9UBH0 155 aa6.89□□□□□ -1.31
BRCA1-221ENST00000493795 TRBV7-9A0A0J9YWB2 115 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 A0A1B0GV90 55 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 CGB1A6NKQ9 187 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 CDIPTO14735 213 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 SLC25A20O43772 301 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 NDUFB4O95168 129 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 LIPFP07098 398 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 FAM106CPP0CH98 169 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 SELENOTP62341 195 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 TCF23Q7RTU1 214 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 LYZL2Q7Z4W2 148 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 C9orf62Q8N4C0 152 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 LHFPL5Q8TAF8 219 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 C2orf88Q9BSF0 95 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 KLK15Q9H2R5 256 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 MS4A5Q9H3V2 200 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 NTMQ9P121 344 aa6.88□□□□□ -1.31
BRCA1-221ENST00000493795 SLC25A10Q9UBX3 287 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms