RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 ZDHHC22Q8N966 263 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 MRGPRDQ8TDS7 321 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 MOB3AQ96BX8 217 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 GSX2Q9BZM3 304 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 BARX1Q9HBU1 254 aaPredicted RBP10.47□□□□□ -0.73
VPS52-220ENST00000493674 ING3Q9NXR8 418 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 LPAR3Q9UBY5 353 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 MIOXQ9UGB7 285 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 FLVCR2Q9UPI3 526 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 VSIG4Q9Y279 399 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 LINC00312Q9Y6C7 94 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.47□□□□□ -0.731e-9■■■■□ 23.6
VPS52-220ENST00000493674 CREBBPQ92793 2442 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 TRAV6A0A075B6T7 132 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 TRBV23-1A0A0A0MS06 115 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 C7orf66A4D0T2 115 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 GPR37O15354 613 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 PEX14O75381 377 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 HBZP02008 142 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 HEXAP06865 529 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 GZMHP20718 246 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 FPR2P25090 351 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 SSTR5P35346 364 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 ECI1P42126 302 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 GLP1RP43220 463 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 GPR6P46095 362 aaPredicted RBP10.46□□□□□ -0.73
VPS52-220ENST00000493674 KRTAP10-9P60411 292 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 SEC61A1P61619 476 aaKnown RBP10.46□□□□□ -0.73
VPS52-220ENST00000493674 HTD2P86397 168 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 SURF2Q15527 256 aaPredicted RBP10.46□□□□□ -0.73
VPS52-220ENST00000493674 C17orf58Q2M2W7 97 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 SCGB2B2Q4G0G5 96 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 ZNF525Q8N782 197 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 OR6F1Q8NGZ6 308 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 OR1L1Q8NH94 360 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 C8orf46Q8TAG6 207 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 NRGNQ92686 78 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 NEIL1Q96FI4 390 aaPredicted RBP10.46□□□□□ -0.73
VPS52-220ENST00000493674 KIRREL1Q96J84 757 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 PATZ1Q9HBE1 687 aaKnown RBP10.46□□□□□ -0.73
VPS52-220ENST00000493674 C19orf12Q9NSK7 152 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 KCNIP1Q9NZI2 227 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 ZNF221Q9UK13 617 aa10.46□□□□□ -0.73
VPS52-220ENST00000493674 UBE2J1Q9Y385 318 aaPredicted RBP10.46□□□□□ -0.73
VPS52-220ENST00000493674 PRRC2AP48634 2157 aaKnown RBP10.45□□□□□ -0.74
VPS52-220ENST00000493674 ZNF729A6NN14 1252 aaPredicted RBP10.45□□□□□ -0.74
VPS52-220ENST00000493674 CYSRT1A8MQ03 144 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 VWC2LB2RUY7 222 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 NDUFS8O00217 210 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 ARPC1BO15143 372 aaKnown RBP10.45□□□□□ -0.74
VPS52-220ENST00000493674 RPS2P15880 293 aaKnown RBP10.45□□□□□ -0.74
VPS52-220ENST00000493674 NDUFB7P17568 137 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 AADACP22760 399 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 FCGR2CP31995 323 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 PDLIM4P50479 330 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 UCP3P55916 312 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 DLX6P56179 175 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 EDDM3BP56851 147 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 TSPAN5P62079 268 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 LDLRAD3Q86YD5 345 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 MARCH1Q8TCQ1 289 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 NINJ1Q92982 152 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 ZNF2Q9BSG1 426 aaPredicted RBP10.45□□□□□ -0.74
VPS52-220ENST00000493674 ALX4Q9H161 411 aaPredicted RBP10.45□□□□□ -0.74
VPS52-220ENST00000493674 TAS2R3Q9NYW6 316 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 CALYQ9NYX4 217 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 OR1A1Q9P1Q5 309 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 GPR132Q9UNW8 380 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 OTOGQ6ZRI0 2925 aa10.45□□□□□ -0.74
VPS52-220ENST00000493674 TRGV10A0A0A0MS01 117 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 KBTBD11-OT1A0A1B0GTJ5 212 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 hADV38S2A0JD32 116 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 BET1O15155 118 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 PRAF2O60831 178 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 PPYP01298 95 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 IL5P05113 134 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 VSIG10L2P0DP72 767 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 NPY4RP50391 375 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 ATP5J2P56134 94 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 LOXL3P58215 753 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 RPL31P62899 125 aaKnown RBP10.44□□□□□ -0.74
VPS52-220ENST00000493674 ZNF273Q14593 569 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 TATDN3Q17R31 274 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 TMEM30BQ3MIR4 351 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 LY6G6FQ5SQ64 297 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 WDR25Q64LD2 544 aaPredicted RBP10.44□□□□□ -0.74
VPS52-220ENST00000493674 NLRC3Q7RTR2 1065 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 ZNF565Q8N9K5 539 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 OR8B3Q8NGG8 313 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 OR10J5Q8NHC4 309 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 C10orf105Q8TEF2 133 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 ARL11Q969Q4 196 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 GALMQ96C23 342 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 OR8B2Q96RD0 313 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 GHITMQ9H3K2 345 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 C5orf66Q9H5L9 145 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 RAB9BQ9NP90 201 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 CLN8Q9UBY8 286 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 OR2W1Q9Y3N9 320 aa10.44□□□□□ -0.74
VPS52-220ENST00000493674 MED13LQ71F56 2210 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms