RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ONECUT1Q9UBC0 465 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 CYB5R1Q9UHQ9 305 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 RNF150Q9ULK6 438 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 SAMD4AQ9UPU9 718 aaKnown RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 FOXJ3Q9UPW0 622 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 ARL2BPQ9Y2Y0 163 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 STRAPQ9Y3F4 350 aaKnown RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 TIMM10BQ9Y5J6 103 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 IGKV1-27A0A075B6S5 117 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 PPIAL4EA0A075B759 164 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 IGHV2-70DA0A0C4DH43 119 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 A0A0G2JMP0 313 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 CENPVL3A0A0U1RRI6 287 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 A0A0X1KG70 313 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 C5orf51A6NDU8 294 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 PPIAL4DF5H284 164 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 RNASEK-C17orf49H0YIS7 233 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF593O00488 134 aaPredicted RBP2.23□□□□□ -2.05
PTCD3-218ENST00000493430 CDIPTO14735 213 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 FKBP6O75344 327 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 MMP23AO75900 390 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 CLIC3O95833 236 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 TXNDC12O95881 172 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 IFNA14P01570 189 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 IGHV3-7P01780 117 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 CD55P08174 381 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 PPIAL4FP0DN26 164 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF823P16415 610 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 HNF1AP20823 631 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 GSTM3P21266 225 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 FKBP2P26885 142 aaKnown RBP2.23□□□□□ -2.05
PTCD3-218ENST00000493430 PRDX6P30041 224 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 GPR183P32249 361 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 CFHR2P36980 270 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 MDH2P40926 338 aaKnown RBP2.23□□□□□ -2.05
PTCD3-218ENST00000493430 MAGEA2P43356 314 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 KIR3DL2P43630 455 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 RAB13P51153 203 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 GPM6AP51674 278 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 BAMBIQ13145 260 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 DGCR6Q14129 220 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 SLC9A3R2Q15599 337 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF79Q15937 498 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF404Q494X3 552 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 SAMD4BQ5PRF9 694 aaKnown RBP2.23□□□□□ -2.05
PTCD3-218ENST00000493430 HCP5Q6MZN7 132 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 SLC27A4Q6P1M0 643 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 FBXW12Q6X9E4 464 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 DPY19L2P2Q6ZN68 376 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 PGAP1Q75T13 922 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 VMO1Q7Z5L0 202 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 LHFPL4Q7Z7J7 247 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 LRRC28Q86X40 367 aaPredicted RBP2.23□□□□□ -2.05
PTCD3-218ENST00000493430 DHFR2Q86XF0 187 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 ANGPTL5Q86XS5 388 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 CALHM1Q8IU99 346 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 SERPINA12Q8IW75 414 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 ELMOD2Q8IZ81 293 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 RDH10Q8IZV5 341 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 ZFP41Q8N8Y5 198 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 CCDC197Q8NCU1 140 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 ZNRF1Q8ND25 227 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 TMEM185AQ8NFB2 350 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 OR4M2Q8NGB6 313 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 OR5D18Q8NGL1 313 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 OR13C5Q8NGS8 318 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 TEX47Q8TBZ9 253 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 OR51E1Q8TCB6 317 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 GIPC3Q8TF64 312 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 THEM6Q8WUY1 208 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 SPRYD4Q8WW59 207 aaPredicted RBP2.23□□□□□ -2.05
PTCD3-218ENST00000493430 RASSF5Q8WWW0 418 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 PYDC1Q8WXC3 89 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 PIGCQ92535 297 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 RAB1CQ92928 201 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 APOBEC3DQ96AK3 386 aaPredicted RBP2.23□□□□□ -2.05
PTCD3-218ENST00000493430 HAVCR1Q96D42 359 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 RAB39BQ96DA2 213 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 REEP6Q96HR9 211 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 GAFA1Q96PS6 74 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 COQ7Q99807 217 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 SH3GL1Q99961 368 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 HOPXQ9BPY8 73 aaPredicted RBP2.23□□□□□ -2.05
PTCD3-218ENST00000493430 SIKE1Q9BRV8 207 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 ATG101Q9BSB4 218 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 CHID1Q9BWS9 393 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 HDHD2Q9H0R4 259 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 SIRPDQ9H106 197 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 POLR2J3Q9H1A7 115 aaKnown RBP2.23□□□□□ -2.05
PTCD3-218ENST00000493430 RIBC2Q9H4K1 309 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 YY1AP1Q9H869 796 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 GORASP2Q9H8Y8 452 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 REEP1Q9H902 201 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 DNAJC4Q9NNZ3 241 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 IL1RAPQ9NPH3 570 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 MED4Q9NPJ6 270 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 GSN-AS1Q9NRJ2 163 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 DDX28Q9NUL7 540 aaKnown RBP2.23□□□□□ -2.05
PTCD3-218ENST00000493430 TVP23BQ9NYZ1 205 aa2.23□□□□□ -2.05
PTCD3-218ENST00000493430 EIF3KQ9UBQ5 218 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms