RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 CD177Q8N6Q3 437 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 KDF1Q8NAX2 398 aaPredicted RBP11.78□□□□□ -0.52
PTPN7-216ENST00000492977 OR10V1Q8NGI7 309 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 PPP1R35Q8TAP8 253 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 GALMQ96C23 342 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 COQ2Q96H96 371 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 TP53RKQ96S44 253 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 SHARPINQ9H0F6 387 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 GSKIPQ9P0R6 139 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 OR1A1Q9P1Q5 309 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 IGF2RP11717 2491 aa11.78□□□□□ -0.52
PTPN7-216ENST00000492977 DSPP15924 2871 aaKnown RBP11.77□□□□□ -0.52
PTPN7-216ENST00000492977 IGKV1D-17A0A075B6S4 117 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 PIGBOS1A0A0B4J2F0 54 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 CCL21O00585 134 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 HSD17B6O14756 317 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 HSPA12AO43301 675 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 ZNF737O75373 536 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 WNT2P09544 360 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 OR4A8P0C604 315 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 LUMP51884 338 aaPredicted RBP11.77□□□□□ -0.53
PTPN7-216ENST00000492977 HOXA4Q00056 320 aaPredicted RBP11.77□□□□□ -0.53
PTPN7-216ENST00000492977 TESK1Q15569 626 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 ESCO2Q56NI9 601 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 SPRNQ5BIV9 151 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 KRBOX4Q5JUW0 171 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 TRAT1Q6PIZ9 186 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 OR8H3Q8N146 312 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 Q8TCH9 128 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 DCUN1D4Q92564 292 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 AKR1E2Q96JD6 320 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 SNX22Q96L94 193 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 LURAP1Q96LR2 239 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 TMEM56Q96MV1 263 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 ESRP2Q9H6T0 727 aaKnown RBP11.77□□□□□ -0.53
PTPN7-216ENST00000492977 GCM1Q9NP62 436 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 RNF7Q9UBF6 113 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 UBE2J1Q9Y385 318 aaPredicted RBP11.77□□□□□ -0.53
PTPN7-216ENST00000492977 TMED3Q9Y3Q3 217 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 TMEM56-RWDD3S4R434 201 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 PCNX1Q96RV3 2341 aa11.77□□□□□ -0.53
PTPN7-216ENST00000492977 POLEQ07864 2286 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 KANTRA0A1W2PQU2 76 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 H0YIZ8 118 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 PGLYRP1O75594 196 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-216ENST00000492977 CD55P08174 381 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 NUP62P37198 522 aaPredicted RBP11.76□□□□□ -0.53
PTPN7-216ENST00000492977 GABRA2P47869 451 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 RAB32Q13637 225 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 NCMAPQ5T1S8 102 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 LYZL2Q7Z4W2 148 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 PRR18Q8N4B5 295 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 BOLLQ8N9W6 283 aaKnown RBP11.76□□□□□ -0.53
PTPN7-216ENST00000492977 FAM222BQ8WU58 562 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 CNTNAP3BQ96NU0 1288 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 CNTNAP3Q9BZ76 1288 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 TOLLIPQ9H0E2 274 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 COQ3Q9NZJ6 369 aa11.76□□□□□ -0.53
PTPN7-216ENST00000492977 DUXBA0A1W2PPF3 345 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 TUBAL3A6NHL2 446 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 C12orf77C9JDV5 145 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 H0Y980 276 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 MGST3O14880 152 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 BCL2L11O43521 198 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 CDS2O95674 445 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 RLN2P04090 185 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 UCP1P25874 307 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 IL2RGP31785 369 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 CEACAM6P40199 344 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 LHFPL5Q8TAF8 219 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 RNASE6Q93091 150 aaKnown RBP11.75□□□□□ -0.53
PTPN7-216ENST00000492977 CITED4Q96RK1 184 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 ZFP57Q9NU63 452 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 NDRG3Q9UGV2 375 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 PLCE1Q9P212 2302 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 C17orf100A8MU93 164 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 HBZP02008 142 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 TFF1P04155 84 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 TNFRSF1AP19438 455 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 F2RP25116 425 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 GLIPR1P48060 266 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 RAB14P61106 215 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 UBA52P62987 128 aaKnown RBP11.75□□□□□ -0.53
PTPN7-216ENST00000492977 SMCO1Q147U7 214 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 CLLU1Q5K131 121 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 TMEM268Q5VZI3 342 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 MEX3BQ6ZN04 569 aaKnown RBP11.75□□□□□ -0.53
PTPN7-216ENST00000492977 ZNF695Q8IW36 515 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 OR5D13Q8NGL4 314 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 OR1L1Q8NH94 360 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 ANGPTL6Q8NI99 470 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 IL22RA2Q969J5 263 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 LRRC46Q96FV0 321 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 GSX2Q9BZM3 304 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 NCOR1P1Q9H4R4 102 aa11.75□□□□□ -0.53
PTPN7-216ENST00000492977 KIAA2026Q5HYC2 2103 aa11.74□□□□□ -0.53
PTPN7-216ENST00000492977 SHISA9B4DS77 424 aa11.74□□□□□ -0.53
PTPN7-216ENST00000492977 K7N7A8 449 aa11.74□□□□□ -0.53
PTPN7-216ENST00000492977 ATXN7O15265 892 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms