RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 A0A075B6Q4 140 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 RAB27BO00194 218 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 TMEM127O75204 238 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 HBZP02008 142 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 RNASE1P07998 156 aaKnown RBP11.33□□□□□ -0.6
CCM2-217ENST00000492883 PLA1AQ53H76 456 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 C16orf87Q6PH81 154 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 SLC16A12Q6ZSM3 486 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 OR52M1Q8NGK5 317 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 AJUBAQ96IF1 538 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 SSX3Q99909 188 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 CMSS1Q9BQ75 279 aaKnown RBP11.33□□□□□ -0.6
CCM2-217ENST00000492883 C19orf24Q9BVV8 132 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 MEGF9Q9H1U4 602 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 MBNL3Q9NUK0 354 aaKnown RBP11.33□□□□□ -0.6
CCM2-217ENST00000492883 ABRACLQ9P1F3 81 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 DPM3Q9P2X0 92 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 GNG12Q9UBI6 72 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 PSG11Q9UQ72 335 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 ETV7Q9Y603 341 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 POMT1Q9Y6A1 747 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 SVEP1Q4LDE5 3571 aa11.33□□□□□ -0.6
CCM2-217ENST00000492883 WNK2Q9Y3S1 2297 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 IGHV3-43A0A0B4J1X8 118 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 LEUTXA8MZ59 168 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 J3QR06 171 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 F2RL2O00254 374 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 NAPSAO96009 420 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 IGLV1-47P01700 117 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 CD3GP09693 182 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 IGHV3-43DP0DP04 118 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 GNB3P16520 340 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 GNG10P50151 68 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 SCAND1P57086 179 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 ACTG1P63261 375 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 LRRC75BQ2VPJ9 315 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 HLA-DRB5Q30154 266 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 UTF1Q5T230 341 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 ZNF554Q86TJ5 538 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.32□□□□□ -0.6
CCM2-217ENST00000492883 OR4P4Q8NGL7 312 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 OR5H6Q8NGV6 325 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 OR5R1Q8NH85 324 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 OR1L1Q8NH94 360 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 CREB3L1Q96BA8 519 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 PHF21AQ96BD5 680 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 GALMQ96C23 342 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 HDHD3Q9BSH5 251 aaPredicted RBP11.32□□□□□ -0.6
CCM2-217ENST00000492883 CHIAQ9BZP6 476 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 NAA50Q9GZZ1 169 aaKnown RBP11.32□□□□□ -0.6
CCM2-217ENST00000492883 C12orf4Q9NQ89 552 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 OR2S2Q9NQN1 319 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 ABCB10Q9NRK6 738 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 GFOD1Q9NXC2 390 aa11.32□□□□□ -0.6
CCM2-217ENST00000492883 ZFHX3Q15911 3703 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 NF1P21359 2839 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 BUB1B-PAK6H3BSN5 160 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 SCGNO76038 276 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 GABARAPO95166 117 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 CRYBA1P05813 215 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 HIST1H1DP16402 221 aaKnown RBP11.31□□□□□ -0.6
CCM2-217ENST00000492883 CEACAM3P40198 252 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 RPL5P46777 297 aaKnown RBP11.31□□□□□ -0.6
CCM2-217ENST00000492883 LOXL3P58215 753 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 ARFRP1Q13795 201 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 ARL6IP1Q15041 203 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 LDLRAD2Q5SZI1 272 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 OLFML2AQ68BL7 652 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 DYNAPQ8N1N2 210 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 OR10V1Q8NGI7 309 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 OR10X1Q8NGY0 326 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 GCDHQ92947 438 aaPredicted RBP11.31□□□□□ -0.6
CCM2-217ENST00000492883 SLC25A46Q96AG3 418 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 MMP28Q9H239 520 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 SCOCQ9UIL1 159 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 MGAT4AQ9UM21 535 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 SPATA2Q9UM82 520 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 KCNK7Q9Y2U2 307 aa11.31□□□□□ -0.6
CCM2-217ENST00000492883 AMMECR1Q9Y4X0 333 aaPredicted RBP11.31□□□□□ -0.6
CCM2-217ENST00000492883 SETD2Q9BYW2 2564 aaPredicted RBP11.3□□□□□ -0.6
CCM2-217ENST00000492883 TRBV6-6A0A0A6YYG2 114 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 A0A1W2PPE3 182 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 POM121CA8CG34 1229 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 SERPINE3A8MV23 424 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 H3BUX3 64 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 TALDO1P37837 337 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 AANATQ16613 207 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 CTF1Q16619 201 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 CDNFQ49AH0 187 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 FAM53AQ6NSI3 398 aaPredicted RBP11.3□□□□□ -0.6
CCM2-217ENST00000492883 ZNF880Q6PDB4 577 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 MOB1BQ7L9L4 216 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 C5orf24Q7Z6I8 188 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 CLVS1Q8IUQ0 354 aaPredicted RBP11.3□□□□□ -0.6
CCM2-217ENST00000492883 OR52L2PQ8NGH6 319 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 IL1F10Q8WWZ1 152 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 Q9N2K0 584 aa11.3□□□□□ -0.6
CCM2-217ENST00000492883 VPREB3Q9UKI3 123 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms