RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 NDUFA6P56556 154 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 BACE1P56817 501 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 DEFA1P59665 94 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 DEFA3P59666 94 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 ARL16Q0P5N6 197 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 KIAA0040Q15053 153 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 MLANAQ16655 118 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 PRR31Q5SQ13 230 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 FAM120AOSQ5T036 256 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 BCL2L15Q5TBC7 163 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 C1orf189Q5VU69 101 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 STAC2Q6ZMT1 411 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 Q6ZTK2 550 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 ZNF550Q7Z398 422 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 ZNF615Q8N8J6 731 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 OR11G2Q8NGC1 345 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 OR51A4Q8NGJ6 313 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 OR10D3Q8NH80 312 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 C9orf85Q96MD7 179 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 RDH12Q96NR8 316 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 DERL3Q96Q80 235 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 GPR21Q99679 349 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 MCHR1Q99705 422 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 NAA38Q9BRA0 125 aaKnown RBP3.48□□□□□ -1.85
BRCA1-220ENST00000492859 MRPL45Q9BRJ2 306 aaKnown RBP3.48□□□□□ -1.85
BRCA1-220ENST00000492859 PRADC1Q9BSG0 188 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 DERL1Q9BUN8 251 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 TMEM133Q9H2Q1 129 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 IL36AQ9UHA7 158 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 PTPRFP10586 1907 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 CHD4Q14839 1912 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 GOLGA3Q08378 1498 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 PRXQ9BXM0 1461 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 DISP2A7MBM2 1401 aa3.48□□□□□ -1.85
BRCA1-220ENST00000492859 NPHP4O75161 1426 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-220ENST00000492859 A0A0A6YYD4 124 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 A0A0G2JMM0 328 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 LOC107984640A0A0U1RRK4 108 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 A0A1W2PPB8 328 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 MYBPHLA2RUH7 354 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 KIR3DP1A8MWS1 328 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 PRRG2O14669 202 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 NPIPB7O75200 414 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 HLA-DQB2P05538 268 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 LINC00694P0DN24 101 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 GZMBP10144 247 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 SPNP16150 400 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 GPD1P21695 349 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 CFPP27918 469 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 IMPA1P29218 277 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 SHC1P29353 583 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 TGFBR1P36897 503 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 MARCKSL1P49006 195 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 TMBIM6P55061 237 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 AQP4P55087 323 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 RND3P61587 244 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 LAMTOR4Q0VGL1 99 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 PRDX4Q13162 271 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 PDGFRLQ15198 375 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 BATFQ16520 125 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 CCL15Q16663 113 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 IBA57Q5T440 356 aaKnown RBP3.47□□□□□ -1.85
BRCA1-220ENST00000492859 OLFML2AQ68BL7 652 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 ZNF549Q6P9A3 640 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 Q6ZWC4 215 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 PRSS48Q7RTY5 328 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 P2RY8Q86VZ1 359 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 PIANPQ8IYJ0 282 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 PRR22Q8IZ63 422 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 FBXL14Q8N1E6 418 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 SAMD12Q8N8I0 201 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 OR2T27Q8NH04 317 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 OLIG1Q8TAK6 271 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 SSC4DQ8WTU2 575 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 RXFP2Q8WXD0 754 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 PHYHIPLQ96FC7 376 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 FMC1Q96HJ9 113 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 SIGLEC10Q96LC7 697 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 C2orf48Q96LS8 159 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 PLEKHF1Q96S99 279 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 MIEN1Q9BRT3 115 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 C19orf24Q9BVV8 132 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 TMEM30AQ9NV96 361 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 OR5AC2Q9NZP5 309 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 WRAP73Q9P2S5 460 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-220ENST00000492859 RNF7Q9UBF6 113 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 CHD3Q12873 2000 aaKnown RBP3.47□□□□□ -1.85
BRCA1-220ENST00000492859 CHD2O14647 1828 aaKnown RBP3.47□□□□□ -1.85
BRCA1-220ENST00000492859 A0A1B0GUL6 1792 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 UGGT2Q9NYU1 1516 aa3.47□□□□□ -1.85
BRCA1-220ENST00000492859 SCN10AQ9Y5Y9 1956 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 TMED7-TICAM2A0A0A6YYA0 188 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 TRBV5-5A0A0J9YX44 114 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 A0A0U1RQV1 116 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 UBE2QL1A1L167 161 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 C5orf63A6NC05 138 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 RBFOX3A6NFN3 312 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 TMEM212A6NML5 194 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 D6RAR5 112 aa3.46□□□□□ -1.85
BRCA1-220ENST00000492859 H0YJW9 148 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms