RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 UBE2QL1A1L167 161 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 IFITM5A6NNB3 132 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 SDCBPO00560 298 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 MNDAP41218 407 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 NEDD8Q15843 81 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 LTC4SQ16873 150 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 TPTE2P1Q5T6R2 138 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 HES5Q5TA89 166 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 FAM89BQ8N5H3 189 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 C8orf31Q8N9H6 132 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 OR51D1Q8NGF3 324 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 OR4C13Q8NGP0 309 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 OR4K15Q8NH41 348 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 LINC01006Q8NI28 216 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 MRPL30Q8TCC3 161 aaKnown RBP8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 TAF15Q92804 592 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 SULT4A1Q9BR01 284 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 NPFFR1Q9GZQ6 430 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 VCX3AQ9NNX9 186 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 TXNL4BQ9NX01 149 aaKnown RBP8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 GFOD1Q9NXC2 390 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 KCNIP1Q9NZI2 227 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 HSF4Q9ULV5 492 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 SSR3Q9UNL2 185 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 PSG11Q9UQ72 335 aa8.59□□□□□ -1.03
CDC42SE1-206ENST00000492796 A0A087WXM4 84 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 A0A0A6YYD4 124 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 A6NDX4 124 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 FOXI3A8MTJ6 420 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 C12orf77C9JDV5 145 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 LY6LH3BQJ8 138 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 LDLRAD4O15165 306 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 CHST1O43916 411 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 HBZP02008 142 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 BLVRBP30043 206 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 RAB7AP51149 207 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 CLDN12P56749 244 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 OR10A3P58181 314 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 LOXL3P58215 753 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 MADCAM1Q13477 382 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 C2orf76Q3KRA6 126 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 UTF1Q5T230 341 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 MOB1BQ7L9L4 216 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 C16orf82Q7Z2V1 217 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 C6orf201Q7Z4U5 140 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 TPRA1Q86W33 373 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 LINC00311Q8N616 119 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 OR56B1Q8NGI3 324 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 OR10X1Q8NGY0 326 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 WFDC12Q8WWY7 111 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 TOMM40LQ969M1 308 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 RPEQ96AT9 228 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 RIMS4Q9H426 269 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 PLEKHJ1Q9NW61 149 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 RNF114Q9Y508 228 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 TENM1Q9UKZ4 2725 aa8.58□□□□□ -1.04
CDC42SE1-206ENST00000492796 TMEM272A0A1B0GTI8 110 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 NAPSAO96009 420 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 RCC1P18754 421 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 RAB6AP20340 208 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 IL3RAP26951 378 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 GNG10P50151 68 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 RAB13P51153 203 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 TIMM50Q3ZCQ8 353 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 C11orf88Q6PI97 169 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 TSPAN14Q8NG11 270 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 LEAP2Q969E1 77 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 PTX4Q96A99 478 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 AKR1E2Q96JD6 320 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 KCTD7Q96MP8 289 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 OCSTAMPQ9BR26 566 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 FAAP24Q9BTP7 215 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 ZNF696Q9H7X3 374 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 LIN7BQ9HAP6 207 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 TAF9BQ9HBM6 251 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 GNG12Q9UBI6 72 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 RAB22AQ9UL26 194 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 MGAT4AQ9UM21 535 aa8.57□□□□□ -1.04
CDC42SE1-206ENST00000492796 TRBV6-6A0A0A6YYG2 114 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 IGHV3-43A0A0B4J1X8 118 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 NOTOA8MTQ0 251 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 SOCS1O15524 211 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 IGHV3-7P01780 117 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 IGHV3-43DP0DP04 118 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 CD36P16671 472 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 JUNBP17275 347 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 KIR2DS4P43632 304 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 VEGFCP49767 419 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 PROK1P58294 105 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 HTD2P86397 168 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 ZNF816Q0VGE8 651 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 HMGN3Q15651 99 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 STEAP3Q658P3 488 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 ZNF880Q6PDB4 577 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 CCBE1Q6UXH8 406 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 SLC25A48Q6ZT89 311 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 Q6ZTK2 550 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 OR8H3Q8N146 312 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 PRR18Q8N4B5 295 aa8.56□□□□□ -1.04
CDC42SE1-206ENST00000492796 OR1L1Q8NH94 360 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms