RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	PRKACA	P17612	351 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	SLC2A5	P22732	501 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	ERP29	P30040	261 aa	Known RBP	4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	RAB9A	P51151	201 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	CCR9	P51686	369 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	NANOS2	P60321	138 aa	Known RBP	4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	PPP3R1	P63098	170 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	PDZK1IP1	Q13113	114 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	GPR176	Q14439	515 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	RSU1	Q15404	277 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	RBMS2	Q15434	407 aa	Known RBP	4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	LGALS9B	Q3B8N2	356 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	UTS2B	Q765I0	119 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	TCF23	Q7RTU1	214 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	WFDC3	Q8IUB2	231 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	TGIF2LX	Q8IUE1	241 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	SAXO1	Q8IYX7	474 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602		Q8N402	240 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	ZNF555	Q8NEP9	628 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	BBS1	Q8NFJ9	593 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	SLAMF9	Q96A28	289 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	RPE	Q96AT9	228 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	FLYWCH2	Q96CP2	140 aa	Known RBP	4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	TBX5	Q99593	518 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	LIN7C	Q9NUP9	197 aa	Known RBP	4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	SLC2A8	Q9NY64	477 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	TAS2R3	Q9NYW6	316 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	ERGIC3	Q9Y282	383 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	GSTK1	Q9Y2Q3	226 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	RPL36	Q9Y3U8	105 aa	Known RBP	4.04	□□□□□ -1.76
SEC13-219	ENST00000492602		V9GYS6	101 aa		4.04	□□□□□ -1.76
SEC13-219	ENST00000492602	TRBV2	A0A0J9YWF9	115 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	MSGN1	A6NI15	193 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602		A6NIN4	97 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	TMEM212	A6NML5	194 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	LY6L	H3BQJ8	138 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602		M0R129	80 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	SLC16A6	O15403	523 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	MAGEB4	O15481	346 aa	Predicted RBP	4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	SPRY2	O43597	315 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	ZNF780A	O75290	641 aa	Predicted RBP	4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	HSPB1	P04792	205 aa	Known RBP	4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	ISG15	P05161	165 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	LGALS1	P09382	135 aa	Known RBP	4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	ATF1	P18846	271 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	MYL12A	P19105	171 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	RAB3A	P20336	220 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	CDK2	P24941	298 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	MPZ	P25189	248 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	NFYB	P25208	207 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	IL3RA	P26951	378 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	PPIF	P30405	207 aa	Known RBP	4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	PTGFR	P43088	359 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	KCNJ3	P48549	501 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	ZNF146	Q15072	292 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	HLA-DRB5	Q30154	266 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	KRBOX4	Q5JUW0	171 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	UTF1	Q5T230	341 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602		Q5VSD8	79 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	AADACL4	Q5VUY2	407 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	TMEM42	Q69YG0	159 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	C12orf73	Q69YU5	71 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	KDM4D	Q6B0I6	523 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	SLC16A12	Q6ZSM3	486 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	TMEM179B	Q7Z7N9	219 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	AMIGO2	Q86SJ2	522 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	HS3ST5	Q8IZT8	346 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	TPRX1	Q8N7U7	411 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	OR10X1	Q8NGY0	326 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	OR14K1	Q8NGZ2	314 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	OR5AK2	Q8NH90	309 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	TOMM40L	Q969M1	308 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	OPALIN	Q96PE5	141 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	RASL11B	Q9BPW5	248 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	HSPB9	Q9BQS6	159 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	C9orf16	Q9BUW7	83 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	GGTLC1	Q9BX51	225 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	CHST5	Q9GZS9	411 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	ZCCHC4	Q9H5U6	513 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	ADGRL4	Q9HBW9	690 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	HES4	Q9HCC6	221 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	MBNL3	Q9NUK0	354 aa	Known RBP	4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	MRM2	Q9UI43	246 aa	Known RBP	4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	FBXL7	Q9UJT9	491 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	DHDH	Q9UQ10	334 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	MYRF	Q9Y2G1	1151 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	GMPPB	Q9Y5P6	360 aa		4.03	□□□□□ -1.76
SEC13-219	ENST00000492602	IGLV2-18	A0A075B6J9	118 aa		4.02	□□□□□ -1.77
SEC13-219	ENST00000492602	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	4.02	□□□□□ -1.77
SEC13-219	ENST00000492602	LOC107986453	A0A1B0GWG9	222 aa		4.02	□□□□□ -1.77
SEC13-219	ENST00000492602		A0A1W2PPI3	338 aa		4.02	□□□□□ -1.77
SEC13-219	ENST00000492602	CCDC182	A6NF36	153 aa		4.02	□□□□□ -1.77
SEC13-219	ENST00000492602	ZNF729	A6NN14	1252 aa	Predicted RBP	4.02	□□□□□ -1.77
SEC13-219	ENST00000492602		F8VVB4	439 aa		4.02	□□□□□ -1.77
SEC13-219	ENST00000492602		F8VWA3	439 aa		4.02	□□□□□ -1.77
SEC13-219	ENST00000492602		G3V318	75 aa		4.02	□□□□□ -1.77
SEC13-219	ENST00000492602	SPINT2	O43291	252 aa		4.02	□□□□□ -1.77
SEC13-219	ENST00000492602	IGLV1-40	P01703	118 aa		4.02	□□□□□ -1.77
SEC13-219	ENST00000492602	IGHV3-11	P01762	117 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms