RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 SLC16A12Q6ZSM3 486 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 ZNF367Q7RTV3 350 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 SLC25A33Q9BSK2 321 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 TMEM59Q9BXS4 323 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 ACOT13Q9NPJ3 140 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 GFOD1Q9NXC2 390 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 AK6Q9Y3D8 172 aaKnown RBP19.74■□□□□ 0.75
UPF3A-209ENST00000492270 MEGF8Q7Z7M0 2845 aa19.74■□□□□ 0.75
UPF3A-209ENST00000492270 PSMA1P25786 263 aaKnown RBP19.73■□□□□ 0.75
UPF3A-209ENST00000492270 MNDAP41218 407 aa19.73■□□□□ 0.75
UPF3A-209ENST00000492270 QRFPP83859 136 aa19.73■□□□□ 0.75
UPF3A-209ENST00000492270 MADCAM1Q13477 382 aa19.73■□□□□ 0.75
UPF3A-209ENST00000492270 P2RY14Q15391 338 aa19.73■□□□□ 0.75
UPF3A-209ENST00000492270 CCDC144NLQ6NUI1 221 aa19.73■□□□□ 0.75
UPF3A-209ENST00000492270 Q6ZTK2 550 aa19.73■□□□□ 0.75
UPF3A-209ENST00000492270 C5orf24Q7Z6I8 188 aa19.73■□□□□ 0.75
UPF3A-209ENST00000492270 OR52M1Q8NGK5 317 aa19.73■□□□□ 0.75
UPF3A-209ENST00000492270 OR6M1Q8NGM8 313 aa19.73■□□□□ 0.75
UPF3A-209ENST00000492270 OR1L1Q8NH94 360 aa19.73■□□□□ 0.75
UPF3A-209ENST00000492270 LIN7BQ9HAP6 207 aa19.73■□□□□ 0.75
UPF3A-209ENST00000492270 TMEM14DPA8MWL7 114 aa19.72■□□□□ 0.75
UPF3A-209ENST00000492270 CALRP27797 417 aaKnown RBP19.72■□□□□ 0.75
UPF3A-209ENST00000492270 CHATP28329 748 aa19.72■□□□□ 0.75
UPF3A-209ENST00000492270 ARSJQ5FYB0 599 aaPredicted RBP19.72■□□□□ 0.75
UPF3A-209ENST00000492270 PRR18Q8N4B5 295 aa19.72■□□□□ 0.75
UPF3A-209ENST00000492270 OR10X1Q8NGY0 326 aa19.72■□□□□ 0.75
UPF3A-209ENST00000492270 OR56B4Q8NH76 319 aa19.72■□□□□ 0.75
UPF3A-209ENST00000492270 MRPL30Q8TCC3 161 aaKnown RBP19.72■□□□□ 0.75
UPF3A-209ENST00000492270 CAPSLQ8WWF8 208 aa19.72■□□□□ 0.75
UPF3A-209ENST00000492270 CFHR4Q92496 578 aa19.72■□□□□ 0.75
UPF3A-209ENST00000492270 RBM14Q96PK6 669 aaKnown RBP19.72■□□□□ 0.75
UPF3A-209ENST00000492270 SULT4A1Q9BR01 284 aa19.72■□□□□ 0.75
UPF3A-209ENST00000492270 SH2D7A6NKC9 451 aaPredicted RBP19.71■□□□□ 0.75
UPF3A-209ENST00000492270 SLC31A2O15432 143 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 ARL6IP5O75915 188 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 OR2F2O95006 317 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 HBZP02008 142 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 GLAP06280 429 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 GABARAPL2P60520 117 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 EMX1Q04741 257 aaPredicted RBP19.71■□□□□ 0.75
UPF3A-209ENST00000492270 C6orf183Q5T699 404 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 C16orf82Q7Z2V1 217 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 DRAM1Q8N682 238 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 DTX3Q8N9I9 347 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 KCNG3Q8TAE7 436 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 PLGRKTQ9HBL7 147 aa19.71■□□□□ 0.75
UPF3A-209ENST00000492270 A0A0A6YYD4 124 aa19.7■□□□□ 0.74
UPF3A-209ENST00000492270 SLC17A2O00624 439 aa19.7■□□□□ 0.74
UPF3A-209ENST00000492270 HSD17B6O14756 317 aa19.7■□□□□ 0.74
UPF3A-209ENST00000492270 CA11O75493 328 aa19.7■□□□□ 0.74
UPF3A-209ENST00000492270 BPNT1O95861 308 aa19.7■□□□□ 0.74
UPF3A-209ENST00000492270 SNRNP70P08621 437 aaKnown RBP19.7■□□□□ 0.74
UPF3A-209ENST00000492270 REG1BP48304 166 aa19.7■□□□□ 0.74
UPF3A-209ENST00000492270 C6orf201Q7Z4U5 140 aa19.7■□□□□ 0.74
UPF3A-209ENST00000492270 OR10V1Q8NGI7 309 aa19.7■□□□□ 0.74
UPF3A-209ENST00000492270 NEDD4LQ96PU5 975 aa19.7■□□□□ 0.74
UPF3A-209ENST00000492270 TM2D1Q9BX74 207 aa19.7■□□□□ 0.74
UPF3A-209ENST00000492270 FAM90A9PA6NNJ1 464 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 H3BUI4 141 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 SPINT2O43291 252 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 DENRO43583 198 aaKnown RBP19.69■□□□□ 0.74
UPF3A-209ENST00000492270 AMY1AP04745 511 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 AMY2AP04746 511 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 VDAC2P45880 294 aaPredicted RBP19.69■□□□□ 0.74
UPF3A-209ENST00000492270 CLDN12P56749 244 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 LINC00311Q8N616 119 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 ZNF439Q8NDP4 499 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 WIPF2Q8TF74 440 aaPredicted RBP19.69■□□□□ 0.74
UPF3A-209ENST00000492270 OCSTAMPQ9BR26 566 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 FAAP24Q9BTP7 215 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 WNT10AQ9GZT5 417 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 MMP27Q9H306 513 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 TAF9BQ9HBM6 251 aa19.69■□□□□ 0.74
UPF3A-209ENST00000492270 MBNL3Q9NUK0 354 aaKnown RBP19.69■□□□□ 0.74
UPF3A-209ENST00000492270 CD28P10747 220 aa19.68■□□□□ 0.74
UPF3A-209ENST00000492270 RAB7AP51149 207 aa19.68■□□□□ 0.74
UPF3A-209ENST00000492270 C2orf68Q2NKX9 166 aa19.68■□□□□ 0.74
UPF3A-209ENST00000492270 ABCA11PQ4W5N1 156 aa19.68■□□□□ 0.74
UPF3A-209ENST00000492270 TRAT1Q6PIZ9 186 aa19.68■□□□□ 0.74
UPF3A-209ENST00000492270 LYG1Q8N1E2 194 aa19.68■□□□□ 0.74
UPF3A-209ENST00000492270 AKR1E2Q96JD6 320 aa19.68■□□□□ 0.74
UPF3A-209ENST00000492270 LPAR5Q9H1C0 372 aa19.68■□□□□ 0.74
UPF3A-209ENST00000492270 NDUFB11Q9NX14 153 aa19.68■□□□□ 0.74
UPF3A-209ENST00000492270 GNG12Q9UBI6 72 aa19.68■□□□□ 0.74
UPF3A-209ENST00000492270 SHISA3A0PJX4 238 aa19.67■□□□□ 0.74
UPF3A-209ENST00000492270 CCRL2O00421 344 aa19.67■□□□□ 0.74
UPF3A-209ENST00000492270 ARSBP15848 533 aa19.67■□□□□ 0.74
UPF3A-209ENST00000492270 ZNF134P52741 427 aa19.67■□□□□ 0.74
UPF3A-209ENST00000492270 ZNF816Q0VGE8 651 aaPredicted RBP19.67■□□□□ 0.74
UPF3A-209ENST00000492270 GNMTQ14749 295 aa19.67■□□□□ 0.74
UPF3A-209ENST00000492270 RAB11BQ15907 218 aa19.67■□□□□ 0.74
UPF3A-209ENST00000492270 Q6ZPA2 131 aa19.67■□□□□ 0.74
UPF3A-209ENST00000492270 OR8H3Q8N146 312 aa19.67■□□□□ 0.74
UPF3A-209ENST00000492270 C8orf31Q8N9H6 132 aa19.67■□□□□ 0.74
UPF3A-209ENST00000492270 FAM110DQ8TAY7 271 aaPredicted RBP19.67■□□□□ 0.74
UPF3A-209ENST00000492270 Q9H521 79 aa19.67■□□□□ 0.74
UPF3A-209ENST00000492270 IGHV1-3A0A0C4DH29 117 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 SOCS1O15524 211 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 PEX14O75381 377 aa19.66■□□□□ 0.74
UPF3A-209ENST00000492270 FBXO24O75426 580 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms