RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 A0A0A6YYD4 124 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 ZNF878C9JN71 531 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 JTBO76095 146 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 CST4P01036 141 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 IGHV3-13P01766 116 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 S100A8P05109 93 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 S100A9P06702 114 aaKnown RBP7.94□□□□□ -1.14
BRCA1-219ENST00000491747 PI3P19957 117 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 LPAR6P43657 344 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 DVL1P1P54792 670 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-219ENST00000491747 KLF3P57682 345 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-219ENST00000491747 SURF2Q15527 256 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-219ENST00000491747 ANKRD55Q3KP44 614 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 POC1AQ8NBT0 407 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 OR2AJ1Q8NGZ0 328 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 OR51F2Q8NH61 342 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 OR51E1Q8TCB6 317 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 OR10C1Q96KK4 312 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 RTBDNQ9BSG5 229 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-219ENST00000491747 GSKIPQ9P0R6 139 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 KPTNQ9Y664 436 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 ZANQ9Y493 2812 aa7.94□□□□□ -1.14
BRCA1-219ENST00000491747 A0A096LNT2 108 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 COLCA2A8K830 154 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 C1orf196B1AJZ1 125 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 LYNX1G3V0Z9 82 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 FBXO24O75426 580 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 S100A6P06703 90 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 HCKP08631 526 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 FCGR3AP08637 254 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 SMIM6P0DI80 62 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 LYNX1P0DP58 116 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 FOSL1P15407 271 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 CD80P33681 288 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 PSG7Q13046 419 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 IL15RAQ13261 267 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 SMCO1Q147U7 214 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 ZNF718Q3SXZ3 478 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 MBNL2Q5VZF2 373 aaKnown RBP7.93□□□□□ -1.14
BRCA1-219ENST00000491747 RPL7L1Q6DKI1 246 aaKnown RBP7.93□□□□□ -1.14
BRCA1-219ENST00000491747 BHLHE23Q8NDY6 225 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 C10orf105Q8TEF2 133 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 EMG1Q92979 244 aaKnown RBP7.93□□□□□ -1.14
BRCA1-219ENST00000491747 C1orf147Q96MC9 270 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-219ENST00000491747 SPACA5Q96QH8 159 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 GPER1Q99527 375 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 RAB1BQ9H0U4 201 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 C1orf123Q9NWV4 160 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 C5orf63A6NC05 138 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 K7EPK0 472 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 CRTAPO75718 401 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-219ENST00000491747 EIF3GO75821 320 aaKnown RBP eCLIP7.93□□□□□ -1.14
BRCA1-219ENST00000491747 HTR3BO95264 441 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 GAPDHP04406 335 aaKnown RBP7.93□□□□□ -1.14
BRCA1-219ENST00000491747 SFTPBP07988 381 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 HOXB5P09067 269 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 PTGFRP43088 359 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 OR3A4PP47883 348 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 SNU13P55769 128 aaKnown RBP7.93□□□□□ -1.14
BRCA1-219ENST00000491747 TMEM50BP56557 158 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 RNF212Q495C1 297 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 AADACL3Q5VUY0 350 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 BTNL8Q6UX41 500 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 RTN4RL2Q86UN3 420 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 FAM71E2Q8N5Q1 922 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 PNLDC1Q8NA58 520 aaKnown RBP7.93□□□□□ -1.14
BRCA1-219ENST00000491747 CSNK2A3Q8NEV1 391 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 ARHGAP5-AS1Q96IT6 56 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 KIRREL1Q96J84 757 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 ST6GALNAC5Q9BVH7 336 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 EGLN1Q9GZT9 426 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 OR10A2Q9H208 303 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 MS4A5Q9H3V2 200 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 BANF2Q9H503 90 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 PRR13Q9NZ81 148 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 EHFQ9NZC4 300 aa7.93□□□□□ -1.14
BRCA1-219ENST00000491747 C14orf166Q9Y224 244 aaKnown RBP7.93□□□□□ -1.14
BRCA1-219ENST00000491747 VWC2LB2RUY7 222 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 F5H5K5 113 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 HKR1P10072 659 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 DAOP14920 347 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 RPS2P15880 293 aaKnown RBP7.92□□□□□ -1.14
BRCA1-219ENST00000491747 COL8A2P25067 703 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 GCH1P30793 250 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 RBMXP38159 391 aaKnown RBP7.92□□□□□ -1.14
BRCA1-219ENST00000491747 ECI1P42126 302 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 PRSS12P56730 875 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 ECH1Q13011 328 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 RBM39Q14498 530 aaKnown RBP7.92□□□□□ -1.14
BRCA1-219ENST00000491747 ARL6IP1Q15041 203 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 SPRNQ5BIV9 151 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 CLEC2AQ6UVW9 174 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 DHRS11Q6UWP2 260 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 COLCA1Q6ZS62 124 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 Q71RC1 249 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-219ENST00000491747 OR5AS1Q8N127 324 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 OR13G1Q8NGZ3 307 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 NEU4Q8WWR8 484 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-219ENST00000491747 FAM168AQ92567 244 aa7.92□□□□□ -1.14
BRCA1-219ENST00000491747 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms