RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 C8orf31Q8N9H6 132 aa10.2□□□□□ -0.78
USF1-206ENST00000491629 SUMF2Q8NBJ7 301 aa10.2□□□□□ -0.78
USF1-206ENST00000491629 ZNF439Q8NDP4 499 aa10.2□□□□□ -0.78
USF1-206ENST00000491629 OR13C3Q8NGS6 347 aa10.2□□□□□ -0.78
USF1-206ENST00000491629 ARPC5LQ9BPX5 153 aa10.2□□□□□ -0.78
USF1-206ENST00000491629 C19orf73Q9NVV2 129 aa10.2□□□□□ -0.78
USF1-206ENST00000491629 GABRPO00591 440 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 SOX15O60248 233 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 IGHV4-30-4P0DP06 118 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 DBTP11182 482 aaKnown RBP10.19□□□□□ -0.78
USF1-206ENST00000491629 MYF6P23409 242 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 CNTFRP26992 372 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 RAB9AP51151 201 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 CCR9P51686 369 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 IL13RA2Q14627 380 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 SRSF7Q16629 238 aaKnown RBP eCLIP10.19□□□□□ -0.78
USF1-206ENST00000491629 C19orf54Q5BKX5 351 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 LPCAT4Q643R3 524 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 FAM220AQ7Z4H9 259 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 HAPLN4Q86UW8 402 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 PXT1Q8NFP0 134 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 OR8H1Q8NGG4 311 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 OR52M1Q8NGK5 317 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 ISOC1Q96CN7 298 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 PELI1Q96FA3 418 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 CYYR1Q96J86 154 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 DPCDQ9BVM2 203 aaPredicted RBP10.19□□□□□ -0.78
USF1-206ENST00000491629 GFOD1Q9NXC2 390 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 ZNF107Q9UII5 783 aaPredicted RBP10.19□□□□□ -0.78
USF1-206ENST00000491629 FBXO7Q9Y3I1 522 aa10.19□□□□□ -0.78
USF1-206ENST00000491629 KMT2AQ03164 3969 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 IGHV4OR15-8A0A075B7B6 117 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 A0A087WW49 117 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 IGHV7-81A0A0B4J1V7 117 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 SDCBPO00560 298 aaPredicted RBP10.18□□□□□ -0.78
USF1-206ENST00000491629 LDLRAD4O15165 306 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 ATP6V0E1O15342 81 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 SULT1B1O43704 296 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 OCM2P0CE71 109 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 OCMP0CE72 109 aaPredicted RBP10.18□□□□□ -0.78
USF1-206ENST00000491629 HOXB6P17509 224 aaKnown RBP10.18□□□□□ -0.78
USF1-206ENST00000491629 S100A1P23297 94 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 KCNJ3P48549 501 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 ZNF137PP52743 207 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 FLOT2Q14254 428 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 CT45A1Q5HYN5 189 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 ZNF529Q6P280 563 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 ASCL4Q6XD76 172 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 Q6ZNX1 250 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 SLC25A48Q6ZT89 311 aaKnown RBP10.18□□□□□ -0.78
USF1-206ENST00000491629 PARP16Q8N5Y8 322 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 MINDY2Q8NBR6 621 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 OR51A2Q8NGJ7 313 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 CT45A3Q8NHU0 189 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 CASTOR1Q8WTX7 329 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 CCDC107Q8WV48 283 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 ARPC1AQ92747 370 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 ARL11Q969Q4 196 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 CIB1Q99828 191 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 TOLLIPQ9H0E2 274 aa10.18□□□□□ -0.78
USF1-206ENST00000491629 SLC16A6O15403 523 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 HTR1AP08908 422 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 OR5H8P0DN80 308 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 GZMHP20718 246 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 ATP6V1E1P36543 226 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 NDPQ00604 133 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 ALKBH1Q13686 389 aaKnown RBP10.17□□□□□ -0.78
USF1-206ENST00000491629 GALEQ14376 348 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 CHCHD6Q9BRQ6 235 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 GABARAPL1Q9H0R8 117 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 OR51J1Q9H342 316 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 IFT22Q9H7X7 185 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 FAM118AQ9NWS6 357 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 RHBDL2Q9NX52 303 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 KIAA1456Q9P272 454 aa10.17□□□□□ -0.78
USF1-206ENST00000491629 A8MZ25 164 aa10.16□□□□□ -0.78
USF1-206ENST00000491629 LINC01619G3V211 115 aa10.16□□□□□ -0.78
USF1-206ENST00000491629 BLVRBP30043 206 aaPredicted RBP10.16□□□□□ -0.78
USF1-206ENST00000491629 RCN1Q15293 331 aa10.16□□□□□ -0.78
USF1-206ENST00000491629 THOC7Q6I9Y2 204 aaKnown RBP10.16□□□□□ -0.78
USF1-206ENST00000491629 TMEM65Q6PI78 240 aa10.16□□□□□ -0.78
USF1-206ENST00000491629 KCTD20Q7Z5Y7 419 aa10.16□□□□□ -0.78
USF1-206ENST00000491629 C5orf24Q7Z6I8 188 aa10.16□□□□□ -0.78
USF1-206ENST00000491629 OR8J1Q8NGP2 316 aa10.16□□□□□ -0.78
USF1-206ENST00000491629 TNFAIP8L1Q8WVP5 186 aa10.16□□□□□ -0.78
USF1-206ENST00000491629 NRG4Q8WWG1 115 aa10.16□□□□□ -0.78
USF1-206ENST00000491629 POMPQ9Y244 141 aa10.16□□□□□ -0.78
USF1-206ENST00000491629 TRAV41A0A0B4J266 112 aa10.15□□□□□ -0.78
USF1-206ENST00000491629 C12orf77C9JDV5 145 aa10.15□□□□□ -0.78
USF1-206ENST00000491629 E9PI62 339 aa10.15□□□□□ -0.78
USF1-206ENST00000491629 G3V2T6 193 aa10.15□□□□□ -0.78
USF1-206ENST00000491629 J3QLW9 94 aa10.15□□□□□ -0.78
USF1-206ENST00000491629 GEMIN2O14893 280 aaKnown RBP10.15□□□□□ -0.78
USF1-206ENST00000491629 ORC5O43913 435 aa10.15□□□□□ -0.78
USF1-206ENST00000491629 CDRT1O95170 752 aa10.15□□□□□ -0.78
USF1-206ENST00000491629 HTR3BO95264 441 aa10.15□□□□□ -0.78
USF1-206ENST00000491629 HLA-DRB1P01911 266 aa10.15□□□□□ -0.78
USF1-206ENST00000491629 MT-ND4P03905 459 aa10.15□□□□□ -0.78
USF1-206ENST00000491629 ZNF19P17023 458 aa10.15□□□□□ -0.78
USF1-206ENST00000491629 RBM11P57052 281 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms