RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ARL6IP5O75915 188 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 IGHV3-7P01780 117 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 JUNBP17275 347 aaPredicted RBP13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 FUT3P21217 361 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 SSTR5P35346 364 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 GABARAPL2P60520 117 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 RAB12Q6IQ22 244 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 FOXRED2Q8IWF2 684 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 LYG1Q8N1E2 194 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 OR56B4Q8NH76 319 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 CHPT1Q8WUD6 406 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 CCDC107Q8WV48 283 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 SGCDQ92629 289 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 OCSTAMPQ9BR26 566 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 SELENOIQ9C0D9 397 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 LRRC42Q9Y546 428 aa13.24□□□□□ -0.29
PDLIM2-217ENST00000491330 A0A1W2PRX2 142 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 SERPINE3A8MV23 424 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 HSD17B6O14756 317 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 FGF16O43320 207 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 MT-ND4P03905 459 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 SNRNP70P08621 437 aaKnown RBP13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 CPEP16870 476 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 PSMD7P51665 324 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 HSD17B12Q53GQ0 312 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 LYPD6Q86Y78 171 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 DRAM1Q8N682 238 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 C8orf31Q8N9H6 132 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 OR51D1Q8NGF3 324 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 OR2T10Q8NGZ9 312 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 LEAP2Q969E1 77 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 CNBD2Q96M20 576 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 NEDD4LQ96PU5 975 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 GPR61Q9BZJ8 451 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 ACOT13Q9NPJ3 140 aa13.23□□□□□ -0.29
PDLIM2-217ENST00000491330 PSMB11A5LHX3 300 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 NCBP2LA6PVI3 153 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 PIN1P1O15428 100 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 DENRO43583 198 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 RGS11O94810 467 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 DUS4LO95620 317 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 BPNT1O95861 308 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 UCHL1P09936 223 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 CD37P11049 281 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 MGMTP16455 207 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 SRMP19623 302 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 GALP22466 123 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 CD83Q01151 205 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 SYT6Q5T7P8 510 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 ZNF497Q6ZNH5 498 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 ZNF367Q7RTV3 350 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 ZNF554Q86TJ5 538 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 SVOPQ8N4V2 548 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 LINC00311Q8N616 119 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 COMMD1Q8N668 190 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 MGLLQ99685 303 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 TMED9Q9BVK6 235 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 CCDC90BQ9GZT6 254 aa13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 RCC2Q9P258 522 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-217ENST00000491330 IGKV1D-33P01593 117 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 IGKV1-33P01594 117 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 ZNF816Q0VGE8 651 aaPredicted RBP13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 HNF4GQ14541 408 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 TMEM95Q3KNT9 176 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 C1orf100Q5SVJ3 147 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 LIPKQ5VXJ0 399 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 STEAP3Q658P3 488 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 PRR18Q8N4B5 295 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 OR8H1Q8NGG4 311 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 DPF1Q92782 380 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 ORAI1Q96D31 301 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 GFOD1Q9NXC2 390 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 ABRACLQ9P1F3 81 aa13.21□□□□□ -0.29
PDLIM2-217ENST00000491330 TRAV39A0A0B4J263 110 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 IGHV1-3A0A0C4DH29 117 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 FAM90A9PA6NNJ1 464 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 G3V4G9 280 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 RRP9O43818 475 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 SLC6A1P30531 599 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 Q6ZS46 218 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 CEACAM19Q7Z692 300 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 SLC35E3Q7Z769 313 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 TGIF2LXQ8IUE1 241 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 OR6M1Q8NGM8 313 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 KCNG3Q8TAE7 436 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 FCGR1BQ92637 280 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 RASL11BQ9BPW5 248 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 BANF2Q9H503 90 aa13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 ZMAT5Q9UDW3 170 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-217ENST00000491330 A0A1W2PPI3 338 aa13.19□□□□□ -0.3
PDLIM2-217ENST00000491330 MAGEA13PA6NCF6 341 aa13.19□□□□□ -0.3
PDLIM2-217ENST00000491330 PDCD6O75340 191 aa13.19□□□□□ -0.3
PDLIM2-217ENST00000491330 HSMCR30P0CW71 290 aa13.19□□□□□ -0.3
PDLIM2-217ENST00000491330 CD1BP29016 333 aa13.19□□□□□ -0.3
PDLIM2-217ENST00000491330 SAMD5Q5TGI4 173 aa13.19□□□□□ -0.3
PDLIM2-217ENST00000491330 GAPTQ8N292 157 aa13.19□□□□□ -0.3
PDLIM2-217ENST00000491330 OR4K15Q8NH41 348 aa13.19□□□□□ -0.3
PDLIM2-217ENST00000491330 Q96M66 194 aa13.19□□□□□ -0.3
PDLIM2-217ENST00000491330 OR2S2Q9NQN1 319 aa13.19□□□□□ -0.3
PDLIM2-217ENST00000491330 ZFP57Q9NU63 452 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms