RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 TRAPPC6BQ86SZ2 158 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 RTN4RL2Q86UN3 420 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 LAX1Q8IWV1 398 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 OR11H6Q8NGC7 330 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 MRGPRDQ8TDS7 321 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 DIRAS2Q96HU8 199 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 KIRREL1Q96J84 757 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 C6orf62Q9GZU0 229 aaPredicted RBP10.21□□□□□ -0.77
HDAC1-210ENST00000490081 TOLLIPQ9H0E2 274 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 ZMAT3Q9HA38 289 aaKnown RBP10.21□□□□□ -0.77
HDAC1-210ENST00000490081 TAF9BQ9HBM6 251 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 IDI2-AS1Q9NZ38 188 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 CDC42EP3Q9UKI2 254 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 ANAPC10Q9UM13 185 aa10.21□□□□□ -0.77
HDAC1-210ENST00000490081 CENPVL3A0A0U1RRI6 287 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 FAM25AB3EWG3 89 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 FAM25CB3EWG5 89 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 FAM25GB3EWG6 89 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 TRDCB7Z8K6 153 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 SSX5O60225 188 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 NAT1P18440 290 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 PRSS3P35030 304 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 GLP1RP43220 463 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 LOXL3P58215 753 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 GNG2P59768 71 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 SSBP1Q04837 148 aaKnown RBP10.2□□□□□ -0.78
HDAC1-210ENST00000490081 CNPY1Q3B7I2 92 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 PYHIN1Q6K0P9 492 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 HCP5Q6MZN7 132 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 CNIH2Q6PI25 160 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 CCDC190Q86UF4 302 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 OR4A4PQ8NGN8 299 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 OR6Q1Q8NGQ2 317 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 OR13D1Q8NGV5 346 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 ZNF596Q8TC21 504 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 GPX8Q8TED1 209 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 FAM216AQ8WUB2 273 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 CCDC107Q8WV48 283 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 ARL11Q969Q4 196 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 GALMQ96C23 342 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 CYYR1Q96J86 154 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 TMEM133Q9H2Q1 129 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 EXTL2Q9UBQ6 330 aa10.2□□□□□ -0.78
HDAC1-210ENST00000490081 RNASEK-C17orf49H0YIS7 233 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 ITGB1BP1O14713 200 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 YPEL1O60688 119 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 HBZP02008 142 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 LPLP06858 475 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 CTXN2P0C2S0 81 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 MIDNQ504T8 468 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 KLF17Q5JT82 389 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-210ENST00000490081 HOGA1Q86XE5 327 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 YPEL2Q96QA6 119 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 ABHD1Q96SE0 405 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 HDHD3Q9BSH5 251 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-210ENST00000490081 PCGF1Q9BSM1 259 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 PRDM13Q9H4Q3 707 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 CHMP1AQ9HD42 196 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-210ENST00000490081 ING3Q9NXR8 418 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 PTTG2Q9NZH5 202 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 ZNF107Q9UII5 783 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-210ENST00000490081 JPT1Q9UK76 154 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 ELF5Q9UKW6 265 aaPredicted RBP10.19□□□□□ -0.78
HDAC1-210ENST00000490081 NUP50Q9UKX7 468 aa10.19□□□□□ -0.78
HDAC1-210ENST00000490081 SONP18583 2426 aaKnown RBP10.18□□□□□ -0.78
HDAC1-210ENST00000490081 TRAV39A0A0B4J263 110 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 IGHV1-69DA0A0B4J2H0 117 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 FABP12A6NFH5 140 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 MMP23AO75900 390 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 IGLV1-47P01700 117 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 IGHV1-69P01742 117 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 SSTR5P35346 364 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 HLA-DRB3P79483 266 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 SCGB2A2Q13296 93 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 GPR157Q5UAW9 335 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 ZNF626Q68DY1 528 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 LINC00311Q8N616 119 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 BEND2Q8NDZ0 799 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 OR9G1Q8NH87 305 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 NUDCD2Q8WVJ2 157 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 CABLES2Q9BTV7 478 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 GHITMQ9H3K2 345 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 ZNF286AQ9HBT8 521 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 GFOD1Q9NXC2 390 aa10.18□□□□□ -0.78
HDAC1-210ENST00000490081 MRPS7Q9Y2R9 242 aaKnown RBP10.18□□□□□ -0.78
HDAC1-210ENST00000490081 ANK3Q12955 4377 aaKnown RBP10.18□□□□□ -0.78
HDAC1-210ENST00000490081 TRBV6-7A0A0A0MS04 114 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 IGHV2-26A0A0B4J1V2 119 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 ODF3BA8MYP8 253 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 GABARAPH6UMI1 98 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 FABP7O15540 132 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 GSTZ1O43708 216 aaPredicted RBP10.17□□□□□ -0.78
HDAC1-210ENST00000490081 CRLF1O75462 422 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 RGS11O94810 467 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 GDNFP39905 211 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 PRRX1P54821 245 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 MORN2Q502X0 79 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 PRIMA1Q86XR5 153 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 IZUMO1Q8IYV9 350 aa10.17□□□□□ -0.78
HDAC1-210ENST00000490081 ABHD12Q8N2K0 398 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms