RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 OR10X1Q8NGY0 326 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 CHCHD6Q9BRQ6 235 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 METTL9Q9H1A3 318 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 HIPK2Q9H2X6 1198 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 SPACA1Q9HBV2 294 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 FGF20Q9NP95 211 aaPredicted RBP5.63□□□□□ -1.51
COL9A1-209ENST00000489861 TMEM138Q9NPI0 162 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 MYRFQ9Y2G1 1151 aa5.63□□□□□ -1.51
COL9A1-209ENST00000489861 MEIKINA0A087WXM9 373 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 IGKV1-9A0A0C4DH69 117 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 EFCAB10A6NFE3 127 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 SERPINE3A8MV23 424 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 H0YJX3 145 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 AP4M1O00189 453 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 CCRL2O00421 344 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 IL1AP01583 271 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 GAPDHP04406 335 aaKnown RBP5.62□□□□□ -1.51
COL9A1-209ENST00000489861 MAPK3P27361 379 aaPredicted RBP5.62□□□□□ -1.51
COL9A1-209ENST00000489861 NPBWR2P48146 333 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 NANOS3P60323 173 aaKnown RBP5.62□□□□□ -1.51
COL9A1-209ENST00000489861 AESQ08117 197 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 MPV17LQ2QL34 196 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 YIF1BQ5BJH7 314 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 CXorf66Q5JRM2 361 aaPredicted RBP5.62□□□□□ -1.51
COL9A1-209ENST00000489861 PRAMEF5Q5TYX0 476 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 LGALS9CQ6DKI2 356 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 TEX38Q6PEX7 206 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 TCF23Q7RTU1 214 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 SLC35E3Q7Z769 313 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 CDH26Q8IXH8 852 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 DHRSXQ8N5I4 330 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 TPRX1Q8N7U7 411 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 OR52N4Q8NGI2 321 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 OR51T1Q8NGJ9 327 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 OR52M1Q8NGK5 317 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 OR52N1Q8NH53 320 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 TNFAIP8L1Q8WVP5 186 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 MRPS24Q96EL2 167 aaKnown RBP5.62□□□□□ -1.51
COL9A1-209ENST00000489861 TMEM80Q96HE8 168 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 FAM192AQ9GZU8 254 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 BABAM2Q9NXR7 383 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 CALYQ9NYX4 217 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 IDI2-AS1Q9NZ38 188 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 IL36GQ9NZH8 169 aa5.62□□□□□ -1.51
COL9A1-209ENST00000489861 DIMT1Q9UNQ2 313 aaKnown RBP5.62□□□□□ -1.51
COL9A1-209ENST00000489861 FLG2Q5D862 2391 aaPredicted RBP5.62□□□□□ -1.51
COL9A1-209ENST00000489861 TMEM30CPA0ZSE6 113 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 CXorf65A6NEN9 183 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 J3QR06 171 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 SLC33A1O00400 549 aaPredicted RBP5.61□□□□□ -1.51
COL9A1-209ENST00000489861 MYL12BO14950 172 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 SAP30O75446 220 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 DUSP1P28562 367 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 BDKRB2P30411 391 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 ZNF93P35789 620 aaPredicted RBP5.61□□□□□ -1.51
COL9A1-209ENST00000489861 CDX1P47902 265 aaPredicted RBP5.61□□□□□ -1.51
COL9A1-209ENST00000489861 GLIPR1P48060 266 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 ZNF816Q0VGE8 651 aaPredicted RBP5.61□□□□□ -1.51
COL9A1-209ENST00000489861 RIPK1Q13546 671 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 ATXN7L3Q14CW9 347 aaPredicted RBP5.61□□□□□ -1.51
COL9A1-209ENST00000489861 CDK5R1Q15078 307 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 NHLRC3Q5JS37 347 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 C6orf183Q5T699 404 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 ZNF575Q86XF7 245 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 LYPD6Q86Y78 171 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 TGIF2LXQ8IUE1 241 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 IZUMO1Q8IYV9 350 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 C8orf59Q8N0T1 100 aaPredicted RBP5.61□□□□□ -1.51
COL9A1-209ENST00000489861 MAPKAPK5-AS1Q8N8E1 139 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 C8orf31Q8N9H6 132 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 OR11H1Q8NG94 326 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 OR51A4Q8NGJ6 313 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 OR5D18Q8NGL1 313 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 OR2T10Q8NGZ9 312 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 NEK7Q8TDX7 302 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 CYGBQ8WWM9 190 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 TMEM106AQ96A25 262 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 RFT1Q96AA3 541 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 SMIM19Q96E16 107 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 KIRREL1Q96J84 757 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 RASL11BQ9BPW5 248 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 PDCD1LG2Q9BQ51 273 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 IFT22Q9H7X7 185 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 ZNF286AQ9HBT8 521 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 LIN7CQ9NUP9 197 aaKnown RBP5.61□□□□□ -1.51
COL9A1-209ENST00000489861 CNOT2Q9NZN8 540 aaKnown RBP5.61□□□□□ -1.51
COL9A1-209ENST00000489861 GHRLQ9UBU3 117 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 MYCBP2O75592 4640 aa5.61□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A10PA6NDY2 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A18PA6NE21 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A16PA6NEW6 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 NUPR2A6NF83 97 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A20PA6NIJ5 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A7PA6NKC0 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 LINC01548A6NM66 108 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 NCBP2LA6PVI3 153 aaKnown RBP5.6□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A12PA8MX19 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A5PA8MXJ8 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 FAM90A23PA8MXZ1 464 aa5.6□□□□□ -1.51
COL9A1-209ENST00000489861 F8VVB4 439 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms