RNA–Protein interactions for RNA: ENST00000489475.5

HOXB3-210, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-210ENST00000489475 TMEM230Q96A57 120 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 NCOR1P1Q9H4R4 102 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 OR1A1Q9P1Q5 309 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 UBR5O95071 2799 aaPredicted RBP22.31■■□□□ 1.16
HOXB3-210ENST00000489475 LYNX1G3V0Z9 82 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 HBZP02008 142 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 LYNX1P0DP58 116 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 GZMHP20718 246 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 DHODHQ02127 395 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 ABCA11PQ4W5N1 156 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 LPCAT3Q6P1A2 487 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 C12orf45Q8N5I9 185 aaPredicted RBP22.31■■□□□ 1.16
HOXB3-210ENST00000489475 OR1L1Q8NH94 360 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 CLEC4MQ9H2X3 399 aaPredicted RBP22.31■■□□□ 1.16
HOXB3-210ENST00000489475 OR6C3Q9NZP0 311 aa22.31■■□□□ 1.16
HOXB3-210ENST00000489475 RALYQ9UKM9 306 aaKnown RBP22.31■■□□□ 1.16
HOXB3-210ENST00000489475 NDUFA2O43678 99 aa22.3■■□□□ 1.16
HOXB3-210ENST00000489475 CXCL3P19876 107 aa22.3■■□□□ 1.16
HOXB3-210ENST00000489475 ARL11Q969Q4 196 aa22.3■■□□□ 1.16
HOXB3-210ENST00000489475 DCTN5Q9BTE1 182 aa22.3■■□□□ 1.16
HOXB3-210ENST00000489475 OPN4Q9UHM6 478 aa22.3■■□□□ 1.16
HOXB3-210ENST00000489475 OR2W1Q9Y3N9 320 aa22.3■■□□□ 1.16
HOXB3-210ENST00000489475 SPINT2O43291 252 aa22.29■■□□□ 1.16
HOXB3-210ENST00000489475 MRPS11P82912 194 aaKnown RBP22.29■■□□□ 1.16
HOXB3-210ENST00000489475 SRSF1Q07955 248 aaKnown RBP eCLIP22.29■■□□□ 1.162e-6■■□□□ 13
HOXB3-210ENST00000489475 MGAT4CQ9UBM8 478 aa22.29■■□□□ 1.16
HOXB3-210ENST00000489475 ADAM20O43506 726 aa22.29■■□□□ 1.16
HOXB3-210ENST00000489475 DUS4LO95620 317 aaKnown RBP22.29■■□□□ 1.16
HOXB3-210ENST00000489475 CR1LQ2VPA4 569 aa22.29■■□□□ 1.16
HOXB3-210ENST00000489475 SPICQ8N5J4 248 aa22.29■■□□□ 1.16
HOXB3-210ENST00000489475 CASTOR1Q8WTX7 329 aa22.29■■□□□ 1.16
HOXB3-210ENST00000489475 SECTM1Q8WVN6 248 aa22.29■■□□□ 1.16
HOXB3-210ENST00000489475 C14orf79Q96F83 325 aa22.29■■□□□ 1.16
HOXB3-210ENST00000489475 FYTTD1Q96QD9 318 aaKnown RBP22.29■■□□□ 1.16
HOXB3-210ENST00000489475 TMEM246Q9BRR3 403 aa22.29■■□□□ 1.16
HOXB3-210ENST00000489475 RSRP1Q9BUV0 290 aa22.29■■□□□ 1.16
HOXB3-210ENST00000489475 TNFRSF13BO14836 293 aaPredicted RBP22.28■■□□□ 1.16
HOXB3-210ENST00000489475 RP2O75695 350 aa22.28■■□□□ 1.16
HOXB3-210ENST00000489475 HEXAP06865 529 aa22.28■■□□□ 1.16
HOXB3-210ENST00000489475 SSTR5P35346 364 aa22.28■■□□□ 1.16
HOXB3-210ENST00000489475 PIGPP57054 158 aa22.28■■□□□ 1.16
HOXB3-210ENST00000489475 OR2AK2Q8NG84 335 aa22.28■■□□□ 1.16
HOXB3-210ENST00000489475 ZNF486Q96H40 463 aaPredicted RBP22.28■■□□□ 1.16
HOXB3-210ENST00000489475 PHB2Q99623 299 aa22.28■■□□□ 1.16
HOXB3-210ENST00000489475 SLC25A10Q9UBX3 287 aaPredicted RBP22.28■■□□□ 1.16
HOXB3-210ENST00000489475 COL12A1Q99715 3063 aa22.28■■□□□ 1.16
HOXB3-210ENST00000489475 FAM208BQ5VWN6 2430 aa22.27■■□□□ 1.16
HOXB3-210ENST00000489475 MEX3AA1L020 520 aaKnown RBP22.27■■□□□ 1.16
HOXB3-210ENST00000489475 FSTL3O95633 263 aa22.27■■□□□ 1.16
HOXB3-210ENST00000489475 ANXA3P12429 323 aa22.27■■□□□ 1.16
HOXB3-210ENST00000489475 NDUFB7P17568 137 aa22.27■■□□□ 1.16
HOXB3-210ENST00000489475 CD34P28906 385 aa22.27■■□□□ 1.16
HOXB3-210ENST00000489475 CEACAM6P40199 344 aa22.27■■□□□ 1.16
HOXB3-210ENST00000489475 SGPP2Q8IWX5 399 aa22.27■■□□□ 1.16
HOXB3-210ENST00000489475 MITD1Q8WV92 249 aa22.27■■□□□ 1.16
HOXB3-210ENST00000489475 SLC5A7Q9GZV3 580 aa22.27■■□□□ 1.16
HOXB3-210ENST00000489475 IGKV1D-13A0A0B4J2D9 117 aa22.27■■□□□ 1.15
HOXB3-210ENST00000489475 TEX13DA0A0J9YY54 714 aaPredicted RBP22.27■■□□□ 1.15
HOXB3-210ENST00000489475 SFT2D2O95562 160 aa22.27■■□□□ 1.15
HOXB3-210ENST00000489475 IGKV1-13P0DP09 117 aa22.27■■□□□ 1.15
HOXB3-210ENST00000489475 DAOP14920 347 aa22.27■■□□□ 1.15
HOXB3-210ENST00000489475 TCTE3Q8IZS6 198 aa22.27■■□□□ 1.15
HOXB3-210ENST00000489475 NINJ1Q92982 152 aa22.27■■□□□ 1.15
HOXB3-210ENST00000489475 SLC2A9Q9NRM0 540 aa22.27■■□□□ 1.15
HOXB3-210ENST00000489475 RDH8Q9NYR8 311 aa22.27■■□□□ 1.15
HOXB3-210ENST00000489475 KAAG1Q9UBP8 84 aa22.27■■□□□ 1.15
HOXB3-210ENST00000489475 TRGV10A0A0A0MS01 117 aa22.26■■□□□ 1.15
HOXB3-210ENST00000489475 C15orf65H3BRN8 121 aa22.26■■□□□ 1.15
HOXB3-210ENST00000489475 NDUFB3O43676 98 aa22.26■■□□□ 1.15
HOXB3-210ENST00000489475 SUPT4H1P63272 117 aaKnown RBP22.26■■□□□ 1.15
HOXB3-210ENST00000489475 PHLDA2Q53GA4 152 aa22.26■■□□□ 1.15
HOXB3-210ENST00000489475 C11orf88Q6PI97 169 aa22.26■■□□□ 1.15
HOXB3-210ENST00000489475 LYPD2Q6UXB3 125 aa22.26■■□□□ 1.15
HOXB3-210ENST00000489475 CLEC18BQ6UXF7 455 aa22.26■■□□□ 1.15
HOXB3-210ENST00000489475 RFESDQ8TAC1 157 aa22.26■■□□□ 1.15
HOXB3-210ENST00000489475 DMRTB1Q96MA1 342 aa22.26■■□□□ 1.15
HOXB3-210ENST00000489475 CHD6Q8TD26 2715 aa22.26■■□□□ 1.15
HOXB3-210ENST00000489475 CRYM-AS1A6NIL9 109 aa22.25■■□□□ 1.15
HOXB3-210ENST00000489475 LY6HO94772 140 aa22.25■■□□□ 1.15
HOXB3-210ENST00000489475 GNRHRP30968 328 aa22.25■■□□□ 1.15
HOXB3-210ENST00000489475 TLE4Q04727 773 aa22.25■■□□□ 1.15
HOXB3-210ENST00000489475 SLC9A3R2Q15599 337 aa22.25■■□□□ 1.15
HOXB3-210ENST00000489475 LRRC10Q5BKY1 277 aa22.25■■□□□ 1.15
HOXB3-210ENST00000489475 CCDC71LQ8N9Z2 235 aa22.25■■□□□ 1.15
HOXB3-210ENST00000489475 ZNF436Q9C0F3 470 aaPredicted RBP22.25■■□□□ 1.15
HOXB3-210ENST00000489475 RAB9BQ9NP90 201 aa22.25■■□□□ 1.15
HOXB3-210ENST00000489475 SLC22A5O76082 557 aa22.24■■□□□ 1.15
HOXB3-210ENST00000489475 RPS2P15880 293 aaKnown RBP22.24■■□□□ 1.15
HOXB3-210ENST00000489475 CDKN1AP38936 164 aa22.24■■□□□ 1.15
HOXB3-210ENST00000489475 LUMP51884 338 aaPredicted RBP22.24■■□□□ 1.15
HOXB3-210ENST00000489475 OR10V1Q8NGI7 309 aa22.24■■□□□ 1.15
HOXB3-210ENST00000489475 RTN4IP1Q8WWV3 396 aaPredicted RBP22.24■■□□□ 1.15
HOXB3-210ENST00000489475 OR2S2Q9NQN1 319 aa22.24■■□□□ 1.15
HOXB3-210ENST00000489475 EIF2B2P49770 351 aaKnown RBP22.24■■□□□ 1.15
HOXB3-210ENST00000489475 HTD2P86397 168 aa22.24■■□□□ 1.15
HOXB3-210ENST00000489475 FAM185AQ8N0U4 392 aa22.24■■□□□ 1.15
HOXB3-210ENST00000489475 OR52L2PQ8NGH6 319 aa22.24■■□□□ 1.15
HOXB3-210ENST00000489475 RBM7Q9Y580 266 aaKnown RBP22.24■■□□□ 1.15
HOXB3-210ENST00000489475 GOSR2O14653 212 aa22.23■■□□□ 1.15
HOXB3-210ENST00000489475 IFNA2P01563 188 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms