RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 UNC119Q13432 240 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 MADCAM1Q13477 382 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 ARSJQ5FYB0 599 aaPredicted RBP10.78□□□□□ -0.68
CCL28-202ENST00000489442 UTF1Q5T230 341 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 OR2W3Q7Z3T1 314 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 OR51D1Q8NGF3 324 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 WFDC12Q8WWY7 111 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 TOMM40LQ969M1 308 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 GFI1Q99684 422 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 FAAP24Q9BTP7 215 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 RANBP3Q9H6Z4 567 aaPredicted RBP10.78□□□□□ -0.68
CCL28-202ENST00000489442 PLEKHJ1Q9NW61 149 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 GNG12Q9UBI6 72 aa10.78□□□□□ -0.68
CCL28-202ENST00000489442 IGHV3-43A0A0B4J1X8 118 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 TRAV1-2A0A0B4J238 106 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 A0A1W2PPE3 182 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 TMEM14DPA8MWL7 114 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 OOSP1A8MZH6 123 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 C15orf65H3BRN8 121 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 IGHV3-43DP0DP04 118 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 RCC1P18754 421 aaPredicted RBP10.77□□□□□ -0.69
CCL28-202ENST00000489442 GALP22466 123 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 CD24P25063 80 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 CHATP28329 748 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 KIR2DS4P43632 304 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 CLDN12P56749 244 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 SRSF4Q08170 494 aaKnown RBP10.77□□□□□ -0.69
CCL28-202ENST00000489442 HES5Q5TA89 166 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 C22orf42Q6IC83 251 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 CD200R1LQ6Q8B3 271 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 CCBE1Q6UXH8 406 aaPredicted RBP10.77□□□□□ -0.69
CCL28-202ENST00000489442 C6orf201Q7Z4U5 140 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 OR52M1Q8NGK5 317 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 FAM3DQ96BQ1 224 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 AKR1E2Q96JD6 320 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 NICN1Q9BSH3 213 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 TM2D1Q9BX74 207 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 CHMP1AQ9HD42 196 aaPredicted RBP10.77□□□□□ -0.69
CCL28-202ENST00000489442 FBLN5Q9UBX5 448 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 STEAP1Q9UHE8 339 aa10.77□□□□□ -0.69
CCL28-202ENST00000489442 WNK1Q9H4A3 2382 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 C12orf77C9JDV5 145 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 LY6LH3BQJ8 138 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 HBZP02008 142 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 RAB3BP20337 219 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 PROK1P58294 105 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 QRFPP83859 136 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 C2orf76Q3KRA6 126 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 TMEM30BQ3MIR4 351 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 SULT4A1Q9BR01 284 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 PRSS22Q9GZN4 317 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 TAF9BQ9HBM6 251 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 GFOD1Q9NXC2 390 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 SSR3Q9UNL2 185 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 SIGLEC9Q9Y336 463 aa10.76□□□□□ -0.69
CCL28-202ENST00000489442 TRRAPQ9Y4A5 3859 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 PEX14O75381 377 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 FAM106CPP0CH98 169 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 IL3RAP26951 378 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 VEGFCP49767 419 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 NEDD8Q15843 81 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 KCTD21Q4G0X4 260 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 C11orf88Q6PI97 169 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 GAPTQ8N292 157 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 OR1L1Q8NH94 360 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 SETD6Q8TBK2 473 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 MRPL30Q8TCC3 161 aaKnown RBP10.75□□□□□ -0.69
CCL28-202ENST00000489442 LPAR5Q9H1C0 372 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 OR2S2Q9NQN1 319 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 ABRACLQ9P1F3 81 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 STUB1Q9UNE7 303 aa10.75□□□□□ -0.69
CCL28-202ENST00000489442 IFITM5A6NNB3 132 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 SOCS1O15524 211 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 GAPDHP04406 335 aaKnown RBP10.74□□□□□ -0.69
CCL28-202ENST00000489442 LPLP06858 475 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 RAB7AP51149 207 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 OR10A3P58181 314 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 LOXL3P58215 753 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 HES1Q14469 280 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 Q6ZTK2 550 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 C16orf82Q7Z2V1 217 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 ZNF554Q86TJ5 538 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 OR56B1Q8NGI3 324 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 OR10V1Q8NGI7 309 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 GALMQ96C23 342 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 CITED1Q99966 193 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 OCSTAMPQ9BR26 566 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 MBNL3Q9NUK0 354 aaKnown RBP10.74□□□□□ -0.69
CCL28-202ENST00000489442 TXNL4BQ9NX01 149 aaKnown RBP10.74□□□□□ -0.69
CCL28-202ENST00000489442 RAB22AQ9UL26 194 aa10.74□□□□□ -0.69
CCL28-202ENST00000489442 TET2Q6N021 2002 aaPredicted RBP10.73□□□□□ -0.69
CCL28-202ENST00000489442 A0A0A6YYD4 124 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 TMEM272A0A1B0GTI8 110 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 HSD17B6O14756 317 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 TIMM23O14925 209 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 VSIG10L2P0DP72 767 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 FGF9P31371 208 aaPredicted RBP10.73□□□□□ -0.69
CCL28-202ENST00000489442 EFNB2P52799 333 aa10.73□□□□□ -0.69
CCL28-202ENST00000489442 MRPS15P82914 257 aaKnown RBP10.73□□□□□ -0.69
CCL28-202ENST00000489442 Q3ZCU0 254 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms