RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 LHFPL5Q8TAF8 219 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 MAP1LC3CQ9BXW4 147 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 IGKV3-7A0A075B6H7 116 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 ORM1P02763 201 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 ZNF25P17030 456 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-209ENST00000489180 OR4A4PQ8NGN8 299 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 SOSTQ9BQB4 213 aa15.36■□□□□ 0.05
NPHP4-209ENST00000489180 PITX3O75364 302 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 ASAH2BP0C7U1 165 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 UBE2V2Q15819 145 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 VSTM2AQ8TAG5 236 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 GNG7O60262 68 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 SEMA7AO75326 666 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 LIMS1P48059 325 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 RBM11P57052 281 aaKnown RBP15.35■□□□□ 0.05
NPHP4-209ENST00000489180 TPRX1Q8N7U7 411 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 STARD4Q96DR4 205 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 UPK3AO75631 287 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 SNCGO76070 127 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 REG1BP48304 166 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 SPRED2Q7Z698 418 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 LDLRAD3Q86YD5 345 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 RND1Q92730 232 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 IL17BQ9UHF5 180 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 PCOLCE2Q9UKZ9 415 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 TMSB15BA0A087X1C1 80 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 MOSPD3O75425 235 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 APCSP02743 223 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 OR10J1P30954 320 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 MDP1Q86V88 176 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 DOCK5Q9H7D0 1870 aa15.35■□□□□ 0.05
NPHP4-209ENST00000489180 C1QL1O75973 258 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 OR5A2Q8NGI9 324 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 NRIP2Q9BQI9 281 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 MCM3APO60318 1980 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 CIDEAO60543 219 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 CXorf1O96002 111 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 NMBP08949 121 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 CEACAM3P40198 252 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 C21orf62-AS1Q17RA5 79 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 OR8A1Q8NGG7 326 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 HARBI1Q96MB7 349 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 ERVH48-1M5A8F1 160 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 CTXND1A0A1B0GTU2 59 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 RHBDL1O75783 438 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 GRAMD2BQ96HH9 432 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 RNF7Q9UBF6 113 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 KIAA1217Q5T5P2 1943 aa15.34■□□□□ 0.05
NPHP4-209ENST00000489180 IGSF23A1L1A6 192 aa15.33■□□□□ 0.05
NPHP4-209ENST00000489180 GZMHP20718 246 aa15.33■□□□□ 0.05
NPHP4-209ENST00000489180 BMI1P35226 326 aa15.33■□□□□ 0.05
NPHP4-209ENST00000489180 EIF4EBP2Q13542 120 aaPredicted RBP15.33■□□□□ 0.05
NPHP4-209ENST00000489180 PATE3B3GLJ2 98 aa15.33■□□□□ 0.05
NPHP4-209ENST00000489180 SLC35B1P78383 322 aa15.33■□□□□ 0.05
NPHP4-209ENST00000489180 COL10A1Q03692 680 aa15.33■□□□□ 0.05
NPHP4-209ENST00000489180 RASL11BQ9BPW5 248 aa15.33■□□□□ 0.05
NPHP4-209ENST00000489180 RSG1Q9BU20 258 aa15.33■□□□□ 0.05
NPHP4-209ENST00000489180 SAP30LQ9HAJ7 183 aa15.33■□□□□ 0.05
NPHP4-209ENST00000489180 OR2T8A6NH00 312 aa15.33■□□□□ 0.04
NPHP4-209ENST00000489180 TEPPQ6URK8 271 aa15.33■□□□□ 0.04
NPHP4-209ENST00000489180 OR2J1Q9GZK6 312 aa15.33■□□□□ 0.04
NPHP4-209ENST00000489180 SYNGR1O43759 233 aa15.33■□□□□ 0.04
NPHP4-209ENST00000489180 CELA2AP08217 269 aa15.33■□□□□ 0.04
NPHP4-209ENST00000489180 ZNF660Q6AZW8 331 aaPredicted RBP15.33■□□□□ 0.04
NPHP4-209ENST00000489180 HTN1P15515 57 aa15.33■□□□□ 0.04
NPHP4-209ENST00000489180 NPY1RP25929 384 aa15.33■□□□□ 0.04
NPHP4-209ENST00000489180 RTP5Q14D33 572 aa15.33■□□□□ 0.04
NPHP4-209ENST00000489180 PLPPR5Q32ZL2 321 aa15.33■□□□□ 0.04
NPHP4-209ENST00000489180 FAM74A3Q4VXF1 159 aa15.33■□□□□ 0.04
NPHP4-209ENST00000489180 PITPNC1Q9UKF7 332 aa15.33■□□□□ 0.04
NPHP4-209ENST00000489180 A0A1W2PQF6 199 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 FAM74A7A6NL05 159 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 PGA4P0DJD7 388 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 PGA5P0DJD9 388 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 PSMB2P49721 201 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 PKIAP61925 76 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 ALX4Q9H161 411 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-209ENST00000489180 GLRX2Q9NS18 164 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 CFDP00746 253 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-209ENST00000489180 MELTFP08582 738 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 KLK2P20151 261 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 FAM222BQ8WU58 562 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 TMEM208Q9BTX3 173 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 PRNDQ9UKY0 176 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 ZNF98A6NK75 572 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 DEDDO75618 318 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 RPLP1P05386 114 aaKnown RBP15.32■□□□□ 0.04
NPHP4-209ENST00000489180 LILRB1Q8NHL6 650 aaPredicted RBP15.32■□□□□ 0.04
NPHP4-209ENST00000489180 ZNF665Q9H7R5 613 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 COL4A1P02462 1669 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 SMPD2O60906 423 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 CD3EP07766 207 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 LGALS7P47929 136 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 KHDC3LQ587J8 217 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 NSUN5P2Q63ZY6 315 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 TMEM251Q8N6I4 163 aa15.32■□□□□ 0.04
NPHP4-209ENST00000489180 RPL30P62888 115 aaKnown RBP15.31■□□□□ 0.04
NPHP4-209ENST00000489180 RAB1BQ9H0U4 201 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 OR51B2Q9Y5P1 312 aa15.31■□□□□ 0.04
NPHP4-209ENST00000489180 RIGQ13278 110 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms