RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 SNRNP70P08621 437 aaKnown RBP19.92■□□□□ 0.78
HMGN1-217ENST00000489072 HSMCR30P0CW71 290 aa19.92■□□□□ 0.78
HMGN1-217ENST00000489072 SRMP19623 302 aa19.92■□□□□ 0.78
HMGN1-217ENST00000489072 FUT3P21217 361 aa19.92■□□□□ 0.78
HMGN1-217ENST00000489072 TPBGQ13641 420 aa19.92■□□□□ 0.78
HMGN1-217ENST00000489072 ABCA11PQ4W5N1 156 aa19.92■□□□□ 0.78
HMGN1-217ENST00000489072 HSD17B12Q53GQ0 312 aa19.92■□□□□ 0.78
HMGN1-217ENST00000489072 OR10K2Q6IF99 312 aa19.92■□□□□ 0.78
HMGN1-217ENST00000489072 TMEM91Q6ZNR0 172 aa19.92■□□□□ 0.78
HMGN1-217ENST00000489072 THNSL2Q86YJ6 484 aa19.92■□□□□ 0.78
HMGN1-217ENST00000489072 TRAPPC2LQ9UL33 140 aa19.92■□□□□ 0.78
HMGN1-217ENST00000489072 NOTCH3Q9UM47 2321 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 UBE2QL1A1L167 161 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 PEX14O75381 377 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 MPIG6BO95866 241 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 VSIG8P0DPA2 414 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 CD37P11049 281 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 MAP2K4P45985 399 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 RAB7AP51149 207 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 RPS25P62851 125 aaKnown RBP19.91■□□□□ 0.78
HMGN1-217ENST00000489072 GLT8D1Q68CQ7 371 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 PRSS48Q7RTY5 328 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 LINC00311Q8N616 119 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 CITED2Q99967 270 aaPredicted RBP19.91■□□□□ 0.78
HMGN1-217ENST00000489072 CCDC90BQ9GZT6 254 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 CST11Q9H112 138 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 KCNK15Q9H427 330 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 ISYNA1Q9NPH2 558 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 PLXNB1O43157 2135 aa19.91■□□□□ 0.78
HMGN1-217ENST00000489072 ADARB2-AS1A8MUL3 147 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 PDCD6O75340 191 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 GLAP06280 429 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 LPLP06858 475 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 UBBP0CG47 229 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 FAM106CPP0CH98 169 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 RCC1P18754 421 aaPredicted RBP19.9■□□□□ 0.78
HMGN1-217ENST00000489072 HSPA13P48723 471 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 NSUN5P1Q3KNT7 163 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 OR8H3Q8N146 312 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 C8orf31Q8N9H6 132 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 OR1L1Q8NH94 360 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 CNBD2Q96M20 576 aa19.9■□□□□ 0.78
HMGN1-217ENST00000489072 HSD17B6O14756 317 aa19.89■□□□□ 0.77
HMGN1-217ENST00000489072 SLC31A2O15432 143 aa19.89■□□□□ 0.77
HMGN1-217ENST00000489072 TGP01266 2768 aa19.89■□□□□ 0.77
HMGN1-217ENST00000489072 HBZP02008 142 aa19.89■□□□□ 0.77
HMGN1-217ENST00000489072 ZNF816Q0VGE8 651 aaPredicted RBP19.89■□□□□ 0.77
HMGN1-217ENST00000489072 C6orf183Q5T699 404 aa19.89■□□□□ 0.77
HMGN1-217ENST00000489072 GFI1Q99684 422 aa19.89■□□□□ 0.77
HMGN1-217ENST00000489072 SLC22A1O15245 554 aa19.88■□□□□ 0.77
HMGN1-217ENST00000489072 SPINT2O43291 252 aa19.88■□□□□ 0.77
HMGN1-217ENST00000489072 CA11O75493 328 aa19.88■□□□□ 0.77
HMGN1-217ENST00000489072 CPEP16870 476 aa19.88■□□□□ 0.77
HMGN1-217ENST00000489072 REG1BP48304 166 aa19.88■□□□□ 0.77
HMGN1-217ENST00000489072 RPS27AP62979 156 aaKnown RBP19.88■□□□□ 0.77
HMGN1-217ENST00000489072 MLLT11Q13015 90 aaPredicted RBP19.88■□□□□ 0.77
HMGN1-217ENST00000489072 UNC119Q13432 240 aa19.88■□□□□ 0.77
HMGN1-217ENST00000489072 C5orf24Q7Z6I8 188 aa19.88■□□□□ 0.77
HMGN1-217ENST00000489072 ZNF439Q8NDP4 499 aa19.88■□□□□ 0.77
HMGN1-217ENST00000489072 MRPL30Q8TCC3 161 aaKnown RBP19.88■□□□□ 0.77
HMGN1-217ENST00000489072 MOB4Q9Y3A3 225 aa19.88■□□□□ 0.77
HMGN1-217ENST00000489072 IGHV1-3A0A0C4DH29 117 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 CCRL2O00421 344 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 CHATP28329 748 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 HTR2CP28335 458 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 QRFPP83859 136 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 HES1Q14469 280 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 Q3ZCU0 254 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 NKAPLQ5M9Q1 402 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 NDUFA11Q86Y39 141 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 PRR18Q8N4B5 295 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 OR5AU1Q8NGC0 362 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 OR10V1Q8NGI7 309 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 ST6GALNAC6Q969X2 333 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 MGLLQ99685 303 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 SULT4A1Q9BR01 284 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 TMEM59Q9BXS4 323 aa19.87■□□□□ 0.77
HMGN1-217ENST00000489072 MBNL3Q9NUK0 354 aaKnown RBP19.87■□□□□ 0.77
HMGN1-217ENST00000489072 M0QZK8 103 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 IGKV1D-33P01593 117 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 IGKV1-33P01594 117 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 OPN1MWP04001 364 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 GAPDHP04406 335 aaKnown RBP19.86■□□□□ 0.77
HMGN1-217ENST00000489072 OPN1MW2P0DN77 364 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 OPN1MW3P0DN78 364 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 TMEM11P17152 192 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 ZNF134P52741 427 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 HNF4GQ14541 408 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 TRAT1Q6PIZ9 186 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 C1QL4Q86Z23 238 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 NICN1Q9BSH3 213 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 TAF9BQ9HBM6 251 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 GNG12Q9UBI6 72 aa19.86■□□□□ 0.77
HMGN1-217ENST00000489072 PRKDCP78527 4128 aaKnown RBP19.86■□□□□ 0.77
HMGN1-217ENST00000489072 IGHV3-72A0A0B4J1Y9 119 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 TMEM14DPA8MWL7 114 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 ATP6V1G2O95670 118 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 CD83Q01151 205 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 FABP5Q01469 135 aa19.85■□□□□ 0.77
HMGN1-217ENST00000489072 TRAM1Q15629 374 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms