RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 PLEKHJ1Q9NW61 149 aa15.09■□□□□ 0.01
PTCD3-217ENST00000488801 AK3Q9UIJ7 227 aa15.09■□□□□ 0.01
PTCD3-217ENST00000488801 POM121CA8CG34 1229 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 SNRPBP14678 240 aaKnown RBP15.08■□□□□ 0
PTCD3-217ENST00000488801 NCS1P62166 190 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 HMGN3Q15651 99 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 CTF1Q16619 201 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 Q3ZCU0 254 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 C8orf31Q8N9H6 132 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 OR10R2Q8NGX6 335 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 OR9G1Q8NH87 305 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 RFESDQ8TAC1 157 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 ARL11Q969Q4 196 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 SLC25A38Q96DW6 304 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 MALSU1Q96EH3 234 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 CHIAQ9BZP6 476 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.08■□□□□ 0
PTCD3-217ENST00000488801 GFOD1Q9NXC2 390 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 TRAPPC2LQ9UL33 140 aa15.08■□□□□ 0
PTCD3-217ENST00000488801 DNHD1Q96M86 4753 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 LY6LH3BQJ8 138 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 PAHP00439 452 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 HBZP02008 142 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 PAX6P26367 422 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 RPS19P39019 145 aaKnown RBP15.07■□□□□ 0
PTCD3-217ENST00000488801 LGALS4P56470 323 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 RPL15P61313 204 aaKnown RBP15.07■□□□□ 0
PTCD3-217ENST00000488801 LSM3P62310 102 aaKnown RBP15.07■□□□□ 0
PTCD3-217ENST00000488801 LRRC75BQ2VPJ9 315 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 OLFML2AQ68BL7 652 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 Q6ZTK2 550 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 MOB1BQ7L9L4 216 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 ZNF439Q8NDP4 499 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 OR5R1Q8NH85 324 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 PIFOQ8TCI5 191 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 HDHD3Q9BSH5 251 aaPredicted RBP15.07■□□□□ 0
PTCD3-217ENST00000488801 NAA50Q9GZZ1 169 aaKnown RBP15.07■□□□□ 0
PTCD3-217ENST00000488801 MMP28Q9H239 520 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 DPAGT1Q9H3H5 408 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 RIMS4Q9H426 269 aaPredicted RBP15.07■□□□□ 0
PTCD3-217ENST00000488801 VPREB3Q9UKI3 123 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 PSG11Q9UQ72 335 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 ETV7Q9Y603 341 aa15.07■□□□□ 0
PTCD3-217ENST00000488801 J3QR06 171 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 HIST1H1DP16402 221 aaKnown RBP15.06■□□□□ 0
PTCD3-217ENST00000488801 NFYBP25208 207 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 HTR1DP28221 377 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 DYNLT3P51808 116 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 DYNC1I2Q13409 638 aaKnown RBP15.06■□□□□ 0
PTCD3-217ENST00000488801 C16orf87Q6PH81 154 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 CROCCP3Q8IVE0 287 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 LINC00311Q8N616 119 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 OR5H6Q8NGV6 325 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 OR1L1Q8NH94 360 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 UBALD1Q8TB05 177 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 RAB3CQ96E17 227 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 TAF9BQ9HBM6 251 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 C12orf4Q9NQ89 552 aa15.06■□□□□ 0
PTCD3-217ENST00000488801 METTL21EPA6NDL7 271 aa15.05■□□□□ -0
PTCD3-217ENST00000488801 BUB1B-PAK6H3BSN5 160 aa15.05■□□□□ -0
PTCD3-217ENST00000488801 FAM53AQ6NSI3 398 aaPredicted RBP15.05■□□□□ -0
PTCD3-217ENST00000488801 LEAP2Q969E1 77 aa15.05■□□□□ -0
PTCD3-217ENST00000488801 SLC25A46Q96AG3 418 aa15.05■□□□□ -0
PTCD3-217ENST00000488801 SSX3Q99909 188 aa15.05■□□□□ -0
PTCD3-217ENST00000488801 RAB9BQ9NP90 201 aa15.05■□□□□ -0
PTCD3-217ENST00000488801 RHBDL2Q9NX52 303 aa15.05■□□□□ -0
PTCD3-217ENST00000488801 DPM3Q9P2X0 92 aa15.05■□□□□ -0
PTCD3-217ENST00000488801 TMEM89A2RUT3 159 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 H3BUX3 64 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 SDCBPO00560 298 aaPredicted RBP15.04■□□□□ -0
PTCD3-217ENST00000488801 SPINT2O43291 252 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 HKR1P10072 659 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 COMPP49747 757 aaPredicted RBP15.04■□□□□ -0
PTCD3-217ENST00000488801 VBP1P61758 197 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 HTD2P86397 168 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 SSX2Q16385 188 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 LY6G6FQ5SQ64 297 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 IDNKQ5T6J7 187 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 C5orf24Q7Z6I8 188 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 CREB3L1Q96BA8 519 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 Q9N2K0 584 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 ABRACLQ9P1F3 81 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 JPT1Q9UK76 154 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 SPATA2Q9UM82 520 aa15.04■□□□□ -0
PTCD3-217ENST00000488801 SERPINE3A8MV23 424 aa15.03■□□□□ -0
PTCD3-217ENST00000488801 LEUTXA8MZ59 168 aa15.03■□□□□ -0
PTCD3-217ENST00000488801 GPR137BO60478 399 aa15.03■□□□□ -0
PTCD3-217ENST00000488801 SCGNO76038 276 aa15.03■□□□□ -0
PTCD3-217ENST00000488801 PRRX1P54821 245 aa15.03■□□□□ -0
PTCD3-217ENST00000488801 LTC4SQ16873 150 aa15.03■□□□□ -0
PTCD3-217ENST00000488801 TPTE2P1Q5T6R2 138 aa15.03■□□□□ -0
PTCD3-217ENST00000488801 SLC25A48Q6ZT89 311 aaKnown RBP15.03■□□□□ -0
PTCD3-217ENST00000488801 GPR141Q7Z602 305 aa15.03■□□□□ -0
PTCD3-217ENST00000488801 NDNFQ8TB73 568 aa15.03■□□□□ -0
PTCD3-217ENST00000488801 CMSS1Q9BQ75 279 aaKnown RBP15.03■□□□□ -0
PTCD3-217ENST00000488801 KCNIP1Q9NZI2 227 aa15.03■□□□□ -0
PTCD3-217ENST00000488801 IGHV3-43A0A0B4J1X8 118 aa15.02■□□□□ -0
PTCD3-217ENST00000488801 FAM181BA6NEQ2 426 aa15.02■□□□□ -0
PTCD3-217ENST00000488801 OOSP1A8MZH6 123 aa15.02■□□□□ -0
PTCD3-217ENST00000488801 TOR1AO14656 332 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms