RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 SULT1A2P50226 295 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 BSPH1Q075Z2 132 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 OR4D1Q15615 310 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 ZNF322Q6U7Q0 402 aaPredicted RBP1.32□□□□□ -2.2
CD46-215ENST00000488596 Q6ZRU5 148 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 COPS6Q7L5N1 327 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 TCF24Q7RTU0 167 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 SELENOHQ8IZQ5 122 aaKnown RBP1.32□□□□□ -2.2
CD46-215ENST00000488596 SPERTQ8NA61 448 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 RNASEH2CQ8TDP1 164 aaKnown RBP1.32□□□□□ -2.2
CD46-215ENST00000488596 DTD1Q8TEA8 209 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 LRRC19Q9H756 370 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 TUBA4BQ9H853 241 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 TREM1Q9NP99 234 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 HSPE1-MOB4S4R3N1 261 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 ADAMTS7Q9UKP4 1686 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 DOCK6Q96HP0 2047 aa1.32□□□□□ -2.2
CD46-215ENST00000488596 NUP153P49790 1475 aaKnown RBP1.31□□□□□ -2.2
CD46-215ENST00000488596 KMT2EQ8IZD2 1858 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 IGHV3OR15-7A0A075B7D8 119 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 A8MWP6 167 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 B4DEV8 164 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 TOR1AO14656 332 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 YKT6O15498 198 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 CRYGDP07320 174 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 RD3LP0DJH9 198 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 ATF1P18846 271 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 SYT1P21579 422 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 PSMA1P25786 263 aaKnown RBP1.31□□□□□ -2.2
CD46-215ENST00000488596 PSMD7P51665 324 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 GABARAPL2P60520 117 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 OR8G1Q15617 311 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 EBLN2Q6P2I7 272 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 XKRXQ6PP77 449 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 C2orf73Q8N5S3 287 aaPredicted RBP1.31□□□□□ -2.2
CD46-215ENST00000488596 OR10P1Q8NGE3 313 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 CD200R1Q8TD46 325 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 GTF2H4Q92759 462 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 VPREB3Q9UKI3 123 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 FBXL3Q9UKT7 428 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
CD46-215ENST00000488596 FBN1P35555 2871 aaKnown RBP1.31□□□□□ -2.2
CD46-215ENST00000488596 PCNX2A6NKB5 2137 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 ITGB4P16144 1822 aa1.31□□□□□ -2.2
CD46-215ENST00000488596 VPS37CA5D8V6 355 aaPredicted RBP1.3□□□□□ -2.2
CD46-215ENST00000488596 K7ERQ8 282 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 MPZL2O60487 215 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 PAFAH1B3Q15102 231 aaKnown RBP1.3□□□□□ -2.2
CD46-215ENST00000488596 PDGFRLQ15198 375 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 SYCP1Q15431 976 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 VN1R4Q7Z5H5 301 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 YIPF7Q8N8F6 280 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 OR4K13Q8NH42 304 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 RORBQ92753 470 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 GALMQ96C23 342 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 TMEM56Q96MV1 263 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 FAM210AQ96ND0 272 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 EBNA1BP2Q99848 306 aaKnown RBP1.3□□□□□ -2.2
CD46-215ENST00000488596 SLC19A3Q9BZV2 496 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 C11orf49Q9H6J7 331 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 CHMP5Q9NZZ3 219 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 WASHC3Q9Y3C0 194 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 MTCH2Q9Y6C9 303 aa1.3□□□□□ -2.2
CD46-215ENST00000488596 CHD2O14647 1828 aaKnown RBP1.3□□□□□ -2.2
CD46-215ENST00000488596 ADAMTSL1Q8N6G6 1762 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 LOC102725191A0A1B0GVB3 256 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 C17orf51A8MQB3 221 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 SMLR1H3BR10 107 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 NDUFS6O75380 124 aaKnown RBP1.29□□□□□ -2.2
CD46-215ENST00000488596 ASS1P00966 412 aaKnown RBP1.29□□□□□ -2.2
CD46-215ENST00000488596 P0DMU3 169 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 FAM231AP0DMU4 169 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 FAM231CP0DMU5 169 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 CTSEP14091 401 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 CPMP14384 443 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 ORM2P19652 201 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 GADD45AP24522 165 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 C1QTNF8P60827 252 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 XRCC4Q13426 336 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 ANGPT1Q15389 498 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 TMEM249Q2WGJ8 235 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 FAM229BQ4G0N7 80 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 HENMT1Q5T8I9 393 aaKnown RBP1.29□□□□□ -2.2
CD46-215ENST00000488596 TTC33Q6PID6 262 aaPredicted RBP1.29□□□□□ -2.2
CD46-215ENST00000488596 SPNS3Q6ZMD2 512 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 SDIM1Q6ZPB5 146 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 DOLPP1Q86YN1 238 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 ZBTB8OSQ8IWT0 167 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 BOD1L2Q8IYS8 172 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 DNAAF3Q8N9W5 541 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 OR4P4Q8NGL7 312 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 DYNC2LI1Q8TCX1 351 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 CCDC12Q8WUD4 166 aaPredicted RBP1.29□□□□□ -2.2
CD46-215ENST00000488596 CAPZA3Q96KX2 299 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 HBEGFQ99075 208 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 CHST5Q9GZS9 411 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 AICDAQ9GZX7 198 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 MS4A12Q9NXJ0 267 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 COMMD9Q9P000 198 aa1.29□□□□□ -2.2
CD46-215ENST00000488596 SAMHD1Q9Y3Z3 626 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms