RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 BAMBIQ13145 260 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 HERPUD1Q15011 391 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 ZNF672Q499Z4 452 aaPredicted RBP10.64□□□□□ -0.71
NELFE-209ENST00000488426 CD177Q8N6Q3 437 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 PPP1R35Q8TAP8 253 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 MITD1Q8WV92 249 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 ASB13Q8WXK3 278 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 NEUROG1Q92886 237 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 TMEM230Q96A57 120 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 PHB2Q99623 299 aa10.64□□□□□ -0.71
NELFE-209ENST00000488426 CISD1Q9NZ45 108 aaKnown RBP10.64□□□□□ -0.71
NELFE-209ENST00000488426 USF3Q68DE3 2245 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 IGKV1D-17A0A075B6S4 117 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 LRRC30A6NM36 301 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 NPIPB11E5RHQ5 1161 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 PLAUP00749 431 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 PPYP01298 95 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 GIPP09681 153 aaPredicted RBP10.63□□□□□ -0.71
NELFE-209ENST00000488426 RCC1P18754 421 aaPredicted RBP10.63□□□□□ -0.71
NELFE-209ENST00000488426 AADACP22760 399 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 VAMP1P23763 118 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 CD34P28906 385 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 CCL8P80075 99 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 HMGN3Q15651 99 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 MST1LQ2TV78 715 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 FAM122CQ6P4D5 195 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 NOXA1Q86UR1 476 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 BOLLQ8N9W6 283 aaKnown RBP10.63□□□□□ -0.71
NELFE-209ENST00000488426 PIK3IP1Q96FE7 263 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 SNX22Q96L94 193 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 TMPRSS13Q9BYE2 586 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 SAP30LQ9HAJ7 183 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 SLC23A1Q9UHI7 598 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 C2CD3Q4AC94 2353 aa10.63□□□□□ -0.71
NELFE-209ENST00000488426 NF1P21359 2839 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 IGKV1-6A0A0C4DH72 117 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 BET1O15155 118 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 ZNF737O75373 536 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 TUSC2O75896 110 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 OR2A4O95047 310 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 SFT2D2O95562 160 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 MUC1P15941 1255 aaPredicted RBP10.62□□□□□ -0.71
NELFE-209ENST00000488426 RAP2BP61225 183 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 LPCAT3Q6P1A2 487 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 OR5T2Q8NGG2 359 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 OR2A7Q96R45 310 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 GON7Q9BXV9 100 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 DLL4Q9NR61 685 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 METRNQ9UJH8 293 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 DYSFO75923 2080 aa10.62□□□□□ -0.71
NELFE-209ENST00000488426 NIPBLQ6KC79 2804 aaeCLIP10.62□□□□□ -0.71
NELFE-209ENST00000488426 TRBV6-7A0A0A0MS04 114 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 A0A0B4J2A0 478 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 SLC22A5O76082 557 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 HLA-GP17693 338 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 PI3P19957 117 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 NFYAP23511 347 aaPredicted RBP10.61□□□□□ -0.71
NELFE-209ENST00000488426 ERP29P30040 261 aaKnown RBP10.61□□□□□ -0.71
NELFE-209ENST00000488426 CD80P33681 288 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 GZMKP49863 264 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 FXYD4P59646 89 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 SWI5Q1ZZU3 235 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 TEX36Q5VZQ5 186 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 STUMQ69YW2 141 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 C11orf88Q6PI97 169 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 TRAT1Q6PIZ9 186 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 NLRC3Q7RTR2 1065 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 C1orf87Q8N0U7 546 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 UXS1Q8NBZ7 420 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 OR10J5Q8NHC4 309 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 TOMM40LQ969M1 308 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 COQ2Q96H96 371 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 FOXC2Q99958 501 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 SHARPINQ9H0F6 387 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 RANBP3Q9H6Z4 567 aaPredicted RBP10.61□□□□□ -0.71
NELFE-209ENST00000488426 KCNIP1Q9NZI2 227 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 SHPKQ9UHJ6 478 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 TANC2Q9HCD6 1990 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 DSCAMO60469 2012 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 IGHV3OR15-7A0A075B7D8 119 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 OOEPA6NGQ2 149 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 GOSR2O14653 212 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 MGST3O14880 152 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 CYB5R3P00387 301 aaPredicted RBP10.61□□□□□ -0.71
NELFE-209ENST00000488426 RPS2P15880 293 aaKnown RBP10.61□□□□□ -0.71
NELFE-209ENST00000488426 DNASE1P24855 282 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 GABRA2P47869 451 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 SNRPD2P62316 118 aaKnown RBP10.61□□□□□ -0.71
NELFE-209ENST00000488426 SUPT4H1P63272 117 aaKnown RBP10.61□□□□□ -0.71
NELFE-209ENST00000488426 AESQ08117 197 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 KRBOX4Q5JUW0 171 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 SGPP2Q8IWX5 399 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 MUC15Q8N387 334 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 ZNF561Q8N587 486 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 NINJ1Q92982 152 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 SDSLQ96GA7 329 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 RSRP1Q9BUV0 290 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 KIF25Q9UIL4 384 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 NUP50Q9UKX7 468 aa10.61□□□□□ -0.71
NELFE-209ENST00000488426 CRYM-AS1A6NIL9 109 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms