RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 PRDX1Q06830 199 aaKnown RBP0.46□□□□□ -2.34
SMC4-219ENST00000487747 Q6ZT83 130 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 FAM183BPQ6ZVS7 135 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 OLIG3Q7RTU3 272 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 PID1Q7Z2X4 250 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 VN1R4Q7Z5H5 301 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 ACBD4Q8NC06 268 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 OR8G5Q8NG78 346 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 OR2AE1Q8NHA4 323 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 ERMNQ8TAM6 284 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 CDKL2Q92772 493 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 APOL4Q9BPW4 351 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 ZNF426Q9BUY5 554 aa0.46□□□□□ -2.34
SMC4-219ENST00000487747 RPRD1BQ9NQG5 326 aaKnown RBP0.46□□□□□ -2.34
SMC4-219ENST00000487747 AHNAKQ09666 5890 aaKnown RBP0.45□□□□□ -2.34
SMC4-219ENST00000487747 RNASEK-C17orf49H0YIS7 233 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 UBDO15205 165 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 NAPSAO96009 420 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 TPM2P07951 284 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 STAG3L2P0CL84 134 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 CD36P16671 472 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 RAB25P57735 213 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 OR2B6P58173 313 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 RAB2AP61019 212 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 TIMM23BQ5SRD1 257 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 FAM201AQ5SY85 155 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 LGALS9CQ6DKI2 356 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 TRIML2Q8N7C3 387 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 OR9I1Q8NGQ6 314 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 OR4X1Q8NH49 305 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 SPACA4Q8TDM5 124 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 PDCD6IPQ8WUM4 868 aaKnown RBP0.45□□□□□ -2.34
SMC4-219ENST00000487747 CIDECQ96AQ7 238 aaPredicted RBP0.45□□□□□ -2.34
SMC4-219ENST00000487747 TMIGD2Q96BF3 282 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 CIB1Q99828 191 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 RETNLBQ9BQ08 111 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 TAPBPLQ9BX59 468 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 TXNL4BQ9NX01 149 aaKnown RBP0.45□□□□□ -2.34
SMC4-219ENST00000487747 WASHC3Q9Y3C0 194 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 USH1CQ9Y6N9 552 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 SLX4Q8IY92 1834 aa0.45□□□□□ -2.34
SMC4-219ENST00000487747 TRAV8-2A0A0B4J237 113 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 H3BSA7 217 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 SOD1P00441 154 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 OTCP00480 354 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 GPX1P07203 203 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 OR4A8P0C604 315 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 NQO1P15559 274 aaKnown RBP0.44□□□□□ -2.34
SMC4-219ENST00000487747 SPNP16150 400 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 LPAR6P43657 344 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 CBX5P45973 191 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 HSPA13P48723 471 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 CD164Q04900 197 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 TSPAN31Q12999 210 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 PDGFRLQ15198 375 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 STK38Q15208 465 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 VAMP3Q15836 100 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 HNRNPA1L2Q32P51 320 aaKnown RBP0.44□□□□□ -2.34
SMC4-219ENST00000487747 HBMQ6B0K9 141 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 EBLN2Q6P2I7 272 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 ZNF321PQ8N8H1 164 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 FAM184AQ8NB25 1140 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 ANGPTL6Q8NI99 470 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 DTD1Q8TEA8 209 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 C16orf78Q8WTQ4 265 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 NAP1L5Q96NT1 182 aaPredicted RBP0.44□□□□□ -2.34
SMC4-219ENST00000487747 TBX5Q99593 518 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 BCL7BQ9BQE9 202 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 POTEKPQ9BYX7 375 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 BCL2L14Q9BZR8 327 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 CYSTM1Q9H1C7 97 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 C11orf49Q9H6J7 331 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 METTL8Q9H825 291 aaKnown RBP0.44□□□□□ -2.34
SMC4-219ENST00000487747 SCML1Q9UN30 329 aa0.44□□□□□ -2.34
SMC4-219ENST00000487747 USP42Q9H9J4 1324 aaKnown RBP0.43□□□□□ -2.34
SMC4-219ENST00000487747 IGHV3-73A0A0B4J1V6 119 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 TOR1AO14656 332 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 ENSAO43768 121 aaKnown RBP0.43□□□□□ -2.34
SMC4-219ENST00000487747 LY6HO94772 140 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 CTSEP14091 401 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 RPA3P35244 121 aaPredicted RBP0.43□□□□□ -2.34
SMC4-219ENST00000487747 UGT2B10P36537 528 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 AKR1C2P52895 323 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 BSPH1Q075Z2 132 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 TRAM1Q15629 374 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 MRPL51Q4U2R6 128 aaKnown RBP0.43□□□□□ -2.34
SMC4-219ENST00000487747 CAVIN4Q5BKX8 364 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 SELENOHQ8IZQ5 122 aaKnown RBP0.43□□□□□ -2.34
SMC4-219ENST00000487747 MITD1Q8WV92 249 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 OR5P2Q8WZ92 322 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 GALMQ96C23 342 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 MBOAT7Q96N66 472 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 HSPB9Q9BQS6 159 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 COPS4Q9BT78 406 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 PECRQ9BY49 303 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 MRPL32Q9BYC8 188 aaKnown RBP0.43□□□□□ -2.34
SMC4-219ENST00000487747 C11orf1Q9H5F2 150 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 NDUFB11Q9NX14 153 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 SCN9AQ15858 1988 aa0.43□□□□□ -2.34
SMC4-219ENST00000487747 TRGV2A0A075B6R0 118 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms