RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 LCNL1Q6ZST4 164 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 ZNF695Q8IW36 515 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 ZFP41Q8N8Y5 198 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 TMEM104Q8NE00 496 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 KLHL30-AS1Q8NEE0 82 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 NEK7Q8TDX7 302 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 RTN4IP1Q8WWV3 396 aaPredicted RBP9.59□□□□□ -0.87
VPS16-208ENST00000487461 RAX2Q96IS3 184 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 MCRIP2Q9BUT9 160 aaKnown RBP9.59□□□□□ -0.87
VPS16-208ENST00000487461 DCLRE1BQ9H816 532 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 BATF3Q9NR55 127 aa9.59□□□□□ -0.87
VPS16-208ENST00000487461 LIN7CQ9NUP9 197 aaKnown RBP9.59□□□□□ -0.87
VPS16-208ENST00000487461 SMPD3Q9NY59 655 aaPredicted RBP9.59□□□□□ -0.87
VPS16-208ENST00000487461 DIMT1Q9UNQ2 313 aaKnown RBP9.59□□□□□ -0.87
VPS16-208ENST00000487461 TRBV5-7A0A0A0MS05 114 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 A0A1W2PPK0 400 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 C12orf77C9JDV5 145 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 AIPO00170 330 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 CCL24O00175 119 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 AP4M1O00189 453 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 MOSP00540 346 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 RPLP1P05386 114 aaKnown RBP9.58□□□□□ -0.88
VPS16-208ENST00000487461 VHLP40337 213 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 GPR176Q14439 515 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 Q499Y3 187 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 CT45A1Q5HYN5 189 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 SYT6Q5T7P8 510 aaPredicted RBP9.58□□□□□ -0.88
VPS16-208ENST00000487461 TEX38Q6PEX7 206 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 GLIPR1L1Q6UWM5 242 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 SLC25A48Q6ZT89 311 aaKnown RBP9.58□□□□□ -0.88
VPS16-208ENST00000487461 ZNF485Q8NCK3 441 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 ZNF439Q8NDP4 499 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 CT45A3Q8NHU0 189 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 DPF1Q92782 380 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 MUL1Q969V5 352 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 TMEM80Q96HE8 168 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 CYYR1Q96J86 154 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 PGLYRP3Q96LB9 341 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 RDH12Q96NR8 316 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 S1PR3Q99500 378 aa9.58□□□□□ -0.88
VPS16-208ENST00000487461 RCC2Q9P258 522 aaKnown RBP9.58□□□□□ -0.88
VPS16-208ENST00000487461 EXOSC1Q9Y3B2 195 aaKnown RBP9.58□□□□□ -0.88
VPS16-208ENST00000487461 NBEAL2Q6ZNJ1 2754 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 IRGMA1A4Y4 181 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 MCRIP1C9JLW8 97 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 HBZP02008 142 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 MYL12AP19105 171 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 IL3RAP26951 378 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 F2RL1P55085 397 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 Q3ZCU0 254 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 YIF1BQ5BJH7 314 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 UNQ9370/PRO34162Q6UXP9 181 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 STX19Q8N4C7 294 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 JAGN1Q8N5M9 183 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 OR10V1Q8NGI7 309 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 OR4K15Q8NH41 348 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 OR1L1Q8NH94 360 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 GGHQ92820 318 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 B9D2Q9BPU9 175 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 BANF2Q9H503 90 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 ETAA1Q9NY74 926 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 TRAPPC2LQ9UL33 140 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 MRPS28Q9Y2Q9 187 aaKnown RBP9.57□□□□□ -0.88
VPS16-208ENST00000487461 PEX16Q9Y5Y5 336 aa9.57□□□□□ -0.88
VPS16-208ENST00000487461 SPINT2O43291 252 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 RCC1P18754 421 aaPredicted RBP9.56□□□□□ -0.88
VPS16-208ENST00000487461 ZNF137PP52743 207 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 CFHR3Q02985 330 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 CD69Q07108 199 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 FOXE3Q13461 319 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 GPR50Q13585 617 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 KIR2DS1Q14954 304 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 DEFB136Q30KP8 78 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 RAB12Q6IQ22 244 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 C5orf24Q7Z6I8 188 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 LYPD6Q86Y78 171 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 GAPTQ8N292 157 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 RNF152Q8N8N0 203 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 TFAP2CQ92754 450 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 MRPS24Q96EL2 167 aaKnown RBP9.56□□□□□ -0.88
VPS16-208ENST00000487461 OR14A2Q96R54 314 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 RASL11BQ9BPW5 248 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 HSPB9Q9BQS6 159 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 SPACA1Q9HBV2 294 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 CHCHD3Q9NX63 227 aaKnown RBP9.56□□□□□ -0.88
VPS16-208ENST00000487461 GNG12Q9UBI6 72 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 CKLFQ9UBR5 152 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 COL7A1Q02388 2944 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 DNAH9Q9NYC9 4486 aa9.56□□□□□ -0.88
VPS16-208ENST00000487461 MAS1P04201 325 aa9.55□□□□□ -0.88
VPS16-208ENST00000487461 ELANEP08246 267 aa9.55□□□□□ -0.88
VPS16-208ENST00000487461 FSTP19883 344 aa9.55□□□□□ -0.88
VPS16-208ENST00000487461 CDX1P47902 265 aaPredicted RBP9.55□□□□□ -0.88
VPS16-208ENST00000487461 RAB25P57735 213 aa9.55□□□□□ -0.88
VPS16-208ENST00000487461 ADARB1P78563 741 aaKnown RBP9.55□□□□□ -0.88
VPS16-208ENST00000487461 DGCR2P98153 550 aa9.55□□□□□ -0.88
VPS16-208ENST00000487461 ST3GAL4Q11206 333 aa9.55□□□□□ -0.88
VPS16-208ENST00000487461 DOC2BQ14184 412 aa9.55□□□□□ -0.88
VPS16-208ENST00000487461 LRRC36Q1X8D7 754 aa9.55□□□□□ -0.88
VPS16-208ENST00000487461 CXorf66Q5JRM2 361 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms